Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1050
Parameters: 2 7 7 80 10 50 1000
Length:  34755

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4746--4798
23
2.4
22
76
20
56
9
18
1
69
1.25
4756--4805
24
2.1
23
82
10
57
12
24
0
64
1.27
9032--9116
30
2.8
29
81
13
91
14
22
0
63
1.30
9071--9111
12
3.4
12
82
0
55
12
21
0
65
1.25
9119--9149
12
2.6
12
100
0
62
25
16
12
45
1.83
9214--9252
15
2.6
14
84
15
51
0
17
2
79
0.84
10171--10208
17
2.2
17
86
9
51
10
7
5
76
1.15
10188--10231
13
3.6
11
82
17
52
13
4
6
75
1.17
11993--12089
30
3.2
30
74
8
108
27
25
17
28
1.98
14768--14840
5
14.0
5
73
22
53
76
1
19
2
0.98
14769--14838
37
1.9
36
88
8
106
77
1
18
2
0.97
14776--14827
6
8.5
6
82
16
54
76
1
19
1
0.97
14888--14918
12
2.6
12
100
0
62
45
12
16
25
1.83
17066--17162
30
3.2
30
75
2
106
27
26
16
28
1.97
18814--18910
30
3.2
30
71
8
90
27
15
27
28
1.96
19414--19462
14
3.4
14
78
13
55
4
20
2
73
1.10
20237--20342
42
2.5
42
98
1
203
33
12
14
40
1.83
20325--20369
14
3.3
14
84
6
65
37
0
13
48
1.42
21536--21565
13
2.4
12
94
5
51
83
0
3
13
0.77
23696--23769
21
3.6
21
67
22
50
70
2
20
6
1.23
25131--25178
20
2.4
20
67
0
51
33
18
27
20
1.96
26849--26954
48
2.2
48
85
9
137
14
24
1
59
1.45
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
27982--28015
12
2.8
12
100
0
68
14
0
5
79
0.91
30665--30709
14
3.3
14
78
6
56
35
0
15
48
1.45
33809--33867
10
5.5
11
82
11
70
74
1
5
18
1.09

Tables:   1

The End!