Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3098
Parameters: 2 7 7 80 10 50 1000
Length:  38697

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
203--382
40
4.3
40
79
12
177
27
27
21
23
1.99
8223--8445
40
5.7
40
85
7
269
25
27
22
24
2.00
8223--8445
117
1.9
118
84
6
301
25
27
22
24
2.00
10311--10389
37
2.1
37
88
4
115
25
30
18
25
1.98
10508--10857
47
7.4
47
92
1
547
28
29
8
32
1.87
17642--17825
39
4.7
39
91
1
280
29
27
21
21
1.98
17642--17857
77
2.8
78
86
7
289
28
28
22
20
1.99
25084--25230
40
3.7
40
83
5
120
25
27
21
25
2.00
25130--25310
80
2.3
80
83
9
219
27
27
20
23
1.99
25127--25310
40
4.6
40
81
7
196
28
27
20
23
1.99
32343--32461
39
3.0
41
81
8
147
29
26
21
22
1.99
37885--38015
40
3.3
37
78
10
118
23
19
27
29
1.98
37953--38063
41
2.7
40
79
9
107
28
19
27
24
1.99

Tables:   1

The End!