Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3012
Parameters: 2 7 7 80 10 50 1000
Length:  34572

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2618--2899
50
5.6
51
75
12
212
22
31
20
25
1.98
2674--2862
100
1.9
100
82
10
244
22
33
18
25
1.97
2673--2895
100
2.2
99
79
11
240
21
33
20
24
1.97
4934--4999
21
3.2
21
78
18
75
71
1
18
9
1.20
7139--7180
19
2.2
20
83
12
52
28
2
19
50
1.60
7821--7914
46
2.0
46
89
4
145
22
18
24
35
1.96
9366--9434
10
6.9
10
73
12
61
26
30
15
27
1.96
9367--9442
20
3.8
20
89
5
111
25
30
17
27
1.97
13841--13914
10
7.5
10
73
7
62
24
28
18
28
1.98
13839--13914
20
3.8
19
89
8
116
23
28
18
28
1.98
18065--18327
40
6.6
40
87
3
316
24
20
28
26
1.99
18104--18362
80
3.3
80
84
3
238
25
20
28
25
1.99
25371--25633
40
6.6
40
87
3
316
24
20
28
26
1.99
25410--25668
80
3.3
80
84
3
238
25
20
28
25
1.99
29615--29655
20
1.9
23
85
14
61
48
17
9
24
1.76

Tables:   1

The End!