Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1932
Parameters: 2 7 7 80 10 50 1000
Length:  40818

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11019--11065
20
2.3
20
85
0
67
21
12
36
29
1.91
12734--12839
48
2.2
48
85
9
137
14
24
1
59
1.45
15405--15451
20
2.3
20
85
0
67
21
12
36
29
1.91
21309--21371
21
3.0
21
88
2
81
33
31
4
30
1.78
25063--25106
11
4.0
11
93
0
79
75
9
0
15
1.05
25066--25107
12
3.7
12
87
12
70
80
7
0
11
0.88
25064--25107
22
2.0
22
100
0
88
77
9
0
13
0.99
25151--25207
16
3.5
16
95
4
105
63
5
10
21
1.46
25151--25207
17
3.4
17
97
2
107
63
5
10
21
1.46
31547--31589
22
2.0
22
95
0
77
32
4
37
25
1.77
33380--33433
23
2.3
23
93
0
90
77
3
7
11
1.09
33379--33437
12
5.0
12
93
4
93
74
3
8
13
1.17

Tables:   1

The End!