Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2079
Parameters: 2 7 7 80 10 50 1000
Length:  31592

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1159--1345
40
4.8
40
87
6
226
26
27
21
23
1.99
9300--9624
40
8.3
40
81
8
366
26
29
20
24
1.99
9318--9624
120
2.6
119
95
3
552
26
29
20
24
1.99
15903--16030
52
2.5
52
93
2
215
50
10
23
16
1.75
17160--17366
40
5.2
40
87
4
287
24
21
27
27
1.99
17156--17376
79
2.8
79
85
8
306
25
21
26
26
2.00
17601--17644
22
2.0
21
83
16
54
31
18
13
36
1.90
22080--22184
37
2.8
37
94
0
174
25
30
18
25
1.98
22396--22935
47
11.1
47
81
7
630
26
29
12
31
1.93
22584--22659
23
3.2
25
62
24
63
23
31
13
31
1.93
22396--22935
100
5.5
98
93
1
854
26
29
12
31
1.93
25122--25300
85
2.1
85
97
0
340
26
28
8
36
1.85
26750--26858
57
1.9
58
88
1
166
28
28
19
23
1.98
27069--27420
40
8.8
40
92
0
551
25
29
21
22
1.99
28673--28816
37
3.9
37
94
1
245
25
31
18
24
1.98
28673--28816
73
2.0
74
92
1
245
25
31
18
24
1.98
29027--29507
93
5.0
93
88
5
651
26
30
12
30
1.92
29027--29507
47
10.1
47
89
5
705
26
30
12
30
1.92
29142--29216
23
3.2
23
62
23
57
28
32
10
29
1.90
29027--29507
192
2.5
187
88
6
721
26
30
12
30
1.92
29027--29485
244
1.9
240
92
2
776
26
30
12
30
1.93

Tables:   1

The End!