Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1185
Parameters: 2 7 7 80 10 50 1000
Length:  37880

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1030--1109
26
3.2
26
63
33
66
25
16
28
30
1.96
974--1151
48
3.7
48
77
10
191
24
17
28
29
1.97
3385--3421
15
2.5
15
95
0
65
5
16
21
56
1.59
5168--5247
26
3.2
26
63
33
66
25
16
28
30
1.96
5110--5290
49
3.7
48
76
10
186
24
17
28
29
1.97
7643--7679
15
2.5
15
95
0
65
5
16
21
56
1.59
9368--9500
51
2.6
51
80
9
157
25
17
28
28
1.97
11860--11896
15
2.5
15
95
0
65
5
16
21
56
1.59
13587--13724
50
2.8
49
80
7
163
24
18
26
29
1.98
16069--16105
15
2.5
15
95
0
65
5
16
21
56
1.59
17798--17930
51
2.6
51
80
9
157
25
17
28
28
1.97
20283--20319
15
2.5
15
95
0
65
5
16
21
56
1.59
22069--22149
26
3.2
26
63
30
66
25
16
28
29
1.96
24523--24559
15
2.5
15
95
0
65
5
16
21
56
1.59
26310--26390
26
3.2
26
63
30
66
25
16
28
29
1.96
26251--26446
50
3.9
49
78
5
196
25
17
28
28
1.98
28758--28794
15
2.5
15
95
0
65
5
16
21
56
1.59
33009--33043
14
2.5
14
90
0
52
5
17
20
57
1.60
37164--37196
17
1.9
17
88
11
50
6
15
18
60
1.54

Tables:   1

The End!