Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1230
Parameters: 2 7 7 80 10 50 1000
Length:  41954

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
235--269
11
3.1
11
88
8
52
5
17
0
77
0.96
229--266
17
2.2
18
95
4
69
5
15
0
78
0.91
8047--8106
12
4.6
13
78
16
54
83
15
0
1
0.73
8061--8106
23
2.0
23
91
0
74
86
13
0
0
0.56
18758--18805
20
2.4
20
67
0
51
33
18
27
20
1.96
33695--33738
13
3.5
13
90
3
63
77
4
0
18
0.94
33695--33729
12
2.9
12
100
0
70
77
5
0
17
0.96
34465--34565
52
1.9
52
93
0
175
33
21
17
26
1.96
35898--35951
20
2.7
20
82
0
63
24
20
18
37
1.94
38630--38748
6
19.2
6
68
10
69
71
2
18
7
1.21
38643--38748
6
17.7
6
70
10
74
72
2
17
6
1.18
38630--38704
18
4.1
18
80
3
87
72
4
17
6
1.23
38710--38766
27
2.2
26
84
9
71
71
1
17
8
1.19
38763--38825
33
1.9
33
84
12
85
53
6
26
12
1.62
40600--40653
20
2.7
20
82
0
63
24
20
18
37
1.94
40600--40673
30
2.5
30
86
8
98
21
20
18
39
1.93
40600--40664
20
3.2
20
71
16
53
23
21
16
38
1.93

Tables:   1

The End!