Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2566
Parameters: 2 7 7 80 10 50 1000
Length:  33305

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3725--3908
39
4.6
41
82
11
206
24
22
27
25
2.00
3725--3908
79
2.3
80
83
8
225
24
22
27
25
2.00
3778--3941
78
2.1
79
83
7
201
26
21
27
25
1.99
11641--11825
79
2.3
81
83
7
227
24
22
27
24
2.00
11642--11825
40
4.6
40
82
9
207
25
22
27
24
2.00
11694--11858
79
2.1
79
83
6
201
26
21
27
24
1.99
15701--15725
11
2.3
11
100
0
50
52
0
0
48
1.00
17667--17766
39
2.6
38
84
3
112
31
3
20
46
1.66
23576--23748
46
3.7
46
79
10
208
21
20
27
29
1.98
23573--23743
93
1.8
93
93
0
297
21
21
28
28
1.98
23972--24009
19
2.0
20
85
15
53
36
0
23
39
1.55
31093--31258
90
1.8
92
83
6
223
22
19
27
30
1.98
31481--31518
19
2.0
20
85
15
53
36
0
23
39
1.55

Tables:   1

The End!