Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1490
Parameters: 2 7 7 80 10 50 1000
Length:  36357

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4637--4845
40
5.3
40
89
6
290
24
22
26
25
2.00
5291--5518
40
5.8
40
92
4
358
23
22
28
25
1.99
5291--5544
79
3.2
79
91
3
388
24
22
27
25
2.00
5291--5518
119
1.9
119
91
5
372
23
22
28
25
1.99
5291--5544
40
6.4
38
90
5
348
24
22
27
25
2.00
13352--13579
40
5.8
40
93
2
365
23
22
27
26
1.99
13352--13605
40
6.4
39
91
3
361
24
22
27
25
2.00
18080--18120
21
1.9
22
85
14
59
56
12
0
31
1.36
22530--22700
66
2.6
66
82
6
177
32
16
28
22
1.96
22554--22736
66
2.8
64
79
7
210
28
16
30
23
1.97
26927--27098
67
2.6
66
81
7
170
31
16
29
22
1.96
26951--27134
67
2.8
64
78
8
203
28
16
30
23
1.96
30840--30876
5
7.2
5
93
6
65
81
0
0
18
0.70

Tables:   1

The End!