Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold466
Parameters: 2 7 7 80 10 50 1000
Length:  30025

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10284--10325
22
1.9
22
95
0
75
16
9
19
54
1.69
12769--12809
18
2.2
20
82
8
50
34
2
7
56
1.40
15032--15057
12
2.2
12
100
0
52
7
15
30
46
1.74
15126--15659
114
4.7
114
87
2
738
26
20
26
26
1.99
15126--15659
227
2.4
226
88
3
770
26
20
26
26
1.99
15811--15859
14
3.4
14
82
2
53
28
0
36
34
1.58
15874--15907
8
4.6
7
86
13
50
17
0
50
32
1.47
15874--15907
15
2.3
15
90
10
52
17
0
50
32
1.47
15871--15918
23
2.0
23
88
4
69
16
4
50
29
1.64
16104--16138
15
2.4
14
86
9
52
22
0
37
40
1.55
16118--16223
28
3.7
29
71
16
78
23
0
37
38
1.55
16149--16223
14
5.3
14
75
16
57
24
0
37
38
1.55
16655--17455
146
5.4
148
91
2
1317
34
15
16
32
1.91
16655--17455
297
2.7
296
92
3
1335
34
15
16
32
1.91
20117--20245
23
5.7
23
86
7
174
48
33
2
15
1.58
20117--20246
45
2.9
45
88
4
190
48
33
2
15
1.58
25012--25185
23
7.7
23
76
4
158
50
33
2
13
1.55
25012--25185
46
3.9
44
82
8
183
50
33
2
13
1.55
25012--25184
68
2.6
67
81
3
186
50
33
2
13
1.55

Tables:   1

The End!