Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2069
Parameters: 2 7 7 80 10 50 1000
Length:  37196

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11052--11078
1
27.0
1
100
0
54
100
0
0
0
0.00
12276--12541
86
3.1
88
83
8
314
31
22
22
23
1.98
12287--12586
86
3.5
84
80
7
291
31
23
22
23
1.99
12633--12925
46
6.8
41
71
13
142
30
19
22
27
1.98
12624--13003
87
4.4
87
72
10
294
30
20
22
26
1.98
12546--12930
174
2.2
171
87
4
542
31
19
22
27
1.98
12631--13007
44
8.6
45
73
10
221
29
20
23
26
1.99
12720--12971
131
1.9
128
79
5
274
28
21
24
26
1.99
12546--13008
174
2.7
174
82
5
458
30
20
22
26
1.98
12848--13047
87
2.3
90
76
7
203
28
21
23
26
1.99
14504--14542
3
13.0
3
88
0
60
30
2
2
64
1.21
19402--19451
24
2.1
24
100
0
100
16
4
14
66
1.40
28177--28206
10
2.8
11
90
10
53
36
0
23
40
1.55
28177--28218
21
2.0
21
85
0
57
38
0
19
42
1.51
31359--31665
52
6.1
51
87
7
409
34
14
22
28
1.93
31345--31665
98
3.3
97
85
10
445
34
14
22
28
1.93
31629--31737
37
3.0
37
90
2
177
35
16
22
24
1.95
32992--33135
49
2.9
49
92
1
225
23
14
29
31
1.94
36289--36548
50
5.4
48
88
8
308
34
16
21
28
1.94
36363--36455
44
2.3
38
77
19
114
33
17
20
29
1.95
36330--36639
37
7.1
45
83
12
284
35
15
21
27
1.94
36254--36585
139
2.4
137
83
14
398
34
15
21
28
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
36330--36565
94
2.5
91
83
12
291
35
15
20
28
1.94
36401--36565
50
3.2
53
91
5
252
36
14
21
26
1.92

Tables:   1

The End!