Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2883
Parameters: 2 7 7 80 10 50 1000
Length:  40620

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4860--5082
40
5.7
40
85
6
278
25
28
21
24
1.99
4860--5082
79
2.8
79
84
6
274
25
28
21
24
1.99
12867--13037
78
2.2
80
90
2
265
25
28
21
24
1.99
12867--13089
78
2.8
78
83
6
252
25
27
21
24
1.99
12867--13089
40
5.7
40
84
6
276
25
27
21
24
1.99
17271--17311
19
2.2
19
86
8
57
29
7
7
56
1.54
18116--18746
314
2.0
314
96
0
1172
32
19
16
32
1.93
24417--24474
21
2.9
19
82
7
62
34
17
17
31
1.93
32911--32980
27
2.6
26
95
2
95
31
28
12
27
1.93
32911--33008
28
3.5
28
90
2
135
31
28
13
26
1.94
33455--33481
12
2.2
12
100
0
54
40
0
7
51
1.30

Tables:   1

The End!