Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3293
Parameters: 2 7 7 80 10 50 1000
Length:  17211

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
736--853
37
3.2
38
91
3
179
26
30
16
26
1.97
1047--1238
47
4.1
47
90
2
289
26
28
10
33
1.90
1047--1238
93
2.1
93
90
2
296
26
28
10
33
1.90
5535--5842
40
7.8
40
93
2
498
25
28
22
24
1.99
5535--5842
79
3.9
80
92
3
498
25
28
22
24
1.99
5535--5842
157
1.9
159
90
2
496
25
28
22
24
1.99
7110--7218
37
2.9
37
95
0
191
26
31
19
22
1.98
7411--7480
31
2.2
31
87
12
99
28
25
8
37
1.85
7366--7525
76
2.1
76
83
13
197
28
26
9
35
1.87
7448--7640
47
4.1
47
89
3
282
26
27
10
34
1.90
7540--7611
22
3.1
22
64
24
58
23
29
13
33
1.93
12056--12307
40
6.2
40
82
9
271
26
27
21
25
1.99
12030--12310
80
3.4
78
81
12
318
26
26
22
25
2.00
12063--12305
122
2.0
122
84
8
316
26
27
20
24
1.99
13968--14121
46
3.4
45
81
15
176
24
26
13
35
1.93

Tables:   1

The End!