Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2557
Parameters: 2 7 7 80 10 50 1000
Length:  46039

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11129--11305
27
6.6
27
82
5
178
29
27
15
27
1.96
11129--11305
55
3.3
54
82
4
205
29
27
15
27
1.96
19135--19312
27
6.6
27
84
3
205
29
28
15
26
1.96
19156--19311
82
1.9
81
88
3
233
29
28
15
26
1.96
24074--24247
87
2.0
87
97
0
330
31
22
13
32
1.93
24203--24381
41
4.3
41
84
8
211
36
24
18
20
1.95
24203--24385
84
2.2
83
85
6
246
36
25
19
19
1.95
26796--26835
19
2.0
20
90
4
64
20
7
0
72
1.08
34380--34417
19
2.0
20
89
5
60
21
7
0
71
1.11
39892--40067
41
4.2
41
85
5
212
36
25
19
18
1.94
41742--41853
27
4.2
26
82
7
125
35
21
24
18
1.95
41743--41849
54
2.0
54
85
3
144
36
19
24
19
1.95
41957--42032
26
2.8
27
88
4
100
31
11
22
34
1.90
41959--42032
28
2.8
26
87
4
94
32
9
22
35
1.87

Tables:   1

The End!