Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold648
Parameters: 2 7 7 80 10 50 1000
Length:  25319

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
636--1076
42
10.3
42
75
9
302
30
27
20
21
1.98
636--817
85
2.2
84
83
6
217
33
27
18
20
1.96
7009--7139
9
13.9
9
74
9
109
31
2
21
45
1.64
7009--7140
48
2.8
48
79
3
149
31
2
21
45
1.64
7009--7139
57
2.3
57
83
0
163
31
2
21
45
1.64
8791--8965
46
3.8
45
81
11
221
21
21
28
29
1.98
8788--8957
92
1.8
92
96
0
313
21
21
28
28
1.99
11827--11895
15
4.6
15
83
0
84
11
17
13
57
1.64
11818--11904
30
3.0
30
81
9
99
10
17
16
56
1.67
14271--14446
46
3.8
46
80
12
216
20
21
29
28
1.98
14268--14438
93
1.8
93
94
0
306
20
21
29
28
1.98
17279--17332
24
2.2
25
77
9
58
51
0
7
40
1.30
19787--20090
47
6.4
47
91
1
437
34
8
29
27
1.86
23259--23304
7
6.6
7
79
0
56
43
36
0
19
1.51
23259--23331
21
3.4
21
75
11
67
45
32
0
21
1.53
24564--24697
15
9.1
15
69
16
54
47
32
2
17
1.61
24575--24697
7
16.6
7
72
13
50
48
30
2
17
1.60
24606--24649
21
2.1
21
91
0
70
50
29
2
18
1.59
24589--24644
7
7.9
7
76
11
51
51
30
1
16
1.54
24847--25316
41
11.5
40
84
7
518
24
26
20
29
1.99
24847--25316
80
5.7
81
81
7
520
24
26
20
29
1.99

Tables:   1

The End!