Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3102
Parameters: 2 7 7 80 10 50 1000
Length:  22812

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
158--221
19
3.3
19
78
4
65
32
6
18
42
1.76
187--241
17
2.9
19
78
13
69
36
7
12
43
1.71
168--241
37
1.9
37
86
10
105
35
6
14
43
1.72
1420--1444
13
1.9
13
100
0
50
32
16
16
36
1.90
3381--3643
46
5.7
46
88
4
352
33
8
29
28
1.86
5075--5468
40
9.9
40
89
2
553
23
20
28
27
1.99
5121--5224
17
5.1
22
63
25
68
24
20
27
27
1.99
5075--5468
120
3.3
119
91
1
610
23
20
28
27
1.99
7647--7671
13
1.9
13
100
0
50
32
16
16
36
1.90
9631--9900
47
5.7
47
93
0
423
33
8
29
28
1.87
11352--11748
40
9.9
40
90
1
564
23
20
28
27
1.99
11432--11504
23
3.4
23
66
21
68
23
21
28
26
1.99
11352--11748
120
3.3
120
92
0
632
23
20
28
27
1.99
13931--13955
13
1.9
13
100
0
50
32
16
16
36
1.90
15919--16141
47
4.7
47
91
0
329
33
8
29
28
1.87
20203--20414
46
4.7
45
75
15
179
28
18
28
24
1.98
21918--21990
10
7.2
10
77
13
78
57
12
1
28
1.43
21915--22024
19
5.6
20
77
15
81
58
10
0
30
1.37
21914--21990
30
2.5
30
95
2
136
58
12
1
27
1.43
21959--22008
20
2.5
20
84
12
68
56
10
2
32
1.44

Tables:   1

The End!