Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1115
Parameters: 2 7 7 80 10 50 1000
Length:  45359

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11024--11176
45
3.4
44
77
8
130
30
22
21
25
1.99
11021--11401
44
8.8
43
73
10
199
29
20
23
26
1.99
11285--11446
87
1.9
87
82
2
209
29
21
24
24
1.99
12380--12412
11
3.1
11
82
8
50
9
6
3
81
0.95
13187--13227
3
13.7
3
94
0
55
34
7
0
58
1.26
13179--13233
21
2.6
21
79
2
65
30
12
1
54
1.48
18604--18653
22
2.4
21
80
12
59
40
8
0
52
1.31
23106--23148
16
2.7
16
82
10
52
41
0
2
55
1.12
23917--24047
6
21.8
6
100
0
262
33
0
16
50
1.45
25805--25852
25
1.9
26
87
8
73
66
2
27
4
1.21
27292--27378
36
2.4
37
77
9
90
58
6
6
27
1.50
28785--28864
38
2.1
38
95
0
142
22
5
27
45
1.73
32832--32942
47
2.4
47
72
14
113
50
1
6
41
1.38
34375--34691
44
7.3
44
67
10
145
28
21
18
30
1.97
34360--34831
87
5.5
85
75
8
425
27
22
19
31
1.98
34493--34788
46
6.7
46
73
9
190
26
22
21
29
1.99
34409--34824
41
9.7
41
70
11
201
27
22
20
30
1.98
34409--34889
174
2.8
175
90
3
708
26
22
19
31
1.98
36231--36257
1
27.0
1
100
0
54
0
0
0
100
0.00

Tables:   1

The End!