Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Scaffold2737
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 34934
ACGTcount: A:0.32, C:0.25, G:0.19, T:0.24
Found at i:1226 original size:602 final size:601
Alignment explanation
Indices: 1--1640 Score: 2904
Period size: 602 Copynumber: 2.7 Consensus size: 601
* *
1 GCCCAAGCACGCTTATCTGCGGAGTTCTGATGGGATCCGG-GATATTAGTGCT-GTATGATCGCA
1 GCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG-CATTAGTGCTGGTATGATCGCA
64 CCCGTCAACTCTTGCGCAATCTATTCATATAAAGGC-CTCCCTTATCACACTTGCG-CTCGAATT
65 CCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTC-CCCTTATCACACTTGCGCCTCGAATT
127 TAAATGCAAATTCGACCAAATATCGTTCC-AA-TATTTATTTCAC-AAACGCAAATAACGAATGA
129 TAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGA
*
189 GTTACA-CACGTGGAGAAAACGCAACTAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAA
194 GTTACACCACGTGGAGAAAACGCAACAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAA
*
253 CAC-AGGAC-TCCCAGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTT-ACTGCGTA
259 CACGAGGACTTCCCAGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA
315 GTTCTGATGGGATCCGG-GCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTAT
324 GTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTAT
* *
379 TCATATAAA-G--GCCCC-TATCGCACTTGCGCCTCGAATTTGAATACAATTTCGACCAAATATC
389 TCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTCGAATTTAAATACAAATTCGACCAAATATC
440 GTTCCAAAATATTTATTTCACAAAACGCAAAAAAACGAATGAGTTACACCACGTGGAGAAAACGC
454 GTTCCAAAATATTTATTTCACAAAACGCAAAAAAACGAATGAGTTACACCACGTGGAGAAAACGC
505 AACAAAAAACATTCTATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACC
519 AACAAAAAACATTCTATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACC
*
570 CATCCTAGTACTACTCTC
584 CATCCTAATACTACTCTC
*
588 GCCCAAGCACGCTTAACTGCGAAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCAC
1 GCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCAC
653 CCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCACACTTGCGCCTCGAATTT
66 CCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT-CCCCTTATCACACTTGCGCCTCGAATTT
*
718 CAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAG
130 AAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAG
*
783 TTACACCACGTGGTGAAAACGCAACAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAAC
195 TTACACCACGTGGAGAAAACGCAACAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAAC
848 ACGAGGACTTCCCAAGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA
260 ACGAGGACTTCCC-AGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA
*
913 TTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTAT
324 GTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTAT
978 TCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTCGAATTTAAATACAAATTCGACCAAATATC
389 TCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTCGAATTTAAATACAAATTCGACCAAATATC
* *
1043 GTTCCAAATTATTTATTTCACAAAACGC-AAATAACGAATGAGTTACACCACGTGGAGAAAACGC
454 GTTCCAAAATATTTATTTCACAAAACGCAAAAAAACGAATGAGTTACACCACGTGGAGAAAACGC
*
1107 AACAAAAAAAACATTCTATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCTCAGGAGGTCA
519 AAC--AAAAAACATTCTATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCA
1172 CCCATCCTAATACTACTC-C
582 CCCATCCTAATACTACTCTC
1191 -CCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCAC
1 GCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCAC
*
1255 CCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTACCCATTATCACACTTGCGCCTCGAATTT
66 CCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT-CCCCTTATCACACTTGCGCCTCGAATTT
* * *
1320 AAATGCAAATTCGACCAAATATCATTCCAAATTATTTATTTCACAAAACACAAATAACGACTGAG
130 AAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAG
1385 TTACACCACGTGGAGAAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAA
195 TTACACCACGTGGAGAAAACGCAAC-AAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAA
1450 CACGAGGACTTCCCAGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA
259 CACGAGGACTTCCCAGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGA
1515 GTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTAT
324 GTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTAT
*
1580 TCATATAAAGGCTACCCCTTATCGCACTTGCGCCTCGAATTTAAATACAAATTCGACCAAA
389 TCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTCGAATTTAAATACAAATTCGACCAAA
1641 AAAAACATTC
Statistics
Matches: 1008, Mismatches: 24, Indels: 27
0.95 0.02 0.03
Matches are distributed among these distances:
587 47 0.05
588 48 0.05
589 17 0.02
590 37 0.04
591 2 0.00
592 12 0.01
593 25 0.02
594 59 0.06
595 5 0.00
596 4 0.00
597 42 0.04
598 23 0.02
599 56 0.06
600 1 0.00
602 429 0.43
603 125 0.12
604 76 0.08
ACGTcount: A:0.32, C:0.25, G:0.19, T:0.24
Consensus pattern (601 bp):
GCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCAC
CCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTCCCCTTATCACACTTGCGCCTCGAATTTA
AATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGT
TACACCACGTGGAGAAAACGCAACAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACA
CGAGGACTTCCCAGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGT
TCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTC
ATATAAAGGCTGCCCCTTATCGCACTTGCGCCTCGAATTTAAATACAAATTCGACCAAATATCGT
TCCAAAATATTTATTTCACAAAACGCAAAAAAACGAATGAGTTACACCACGTGGAGAAAACGCAA
CAAAAAACATTCTATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCA
TCCTAATACTACTCTC
Found at i:1361 original size:300 final size:300
Alignment explanation
Indices: 1--1640 Score: 2796
Period size: 302 Copynumber: 5.5 Consensus size: 300
* *
1 GCCCAAGCACGCTTATCTGCGGAGTTCTGATGGGATCCGG-GATATTAGTGCT-GTATGATCGCA
1 GCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG-CATTAGTGCTGGTATGATCGCA
64 CCCGTCAACTCTTGCGCAATCTATTCATATAAAGGC-CTCCCTTATCACACTTGCG-CTCGAATT
65 CCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTC-CCCTTATCACACTTGCGCCTCGAATT
*
127 TAAATGCAAATTCGACCAAATATCGTTCC-AA-TATTTATTTCAC-AAACGCAAATAACGAATGA
129 TAAATACAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGA
*
189 GTTACA-CACGTGGAGAAAACGCAACTAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAA
194 GTTACACCACGTGGAGAAAACGCAACAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAA
253 CAC-AGGAC-TCCCAGAGGTCACCCATCCTAGTACTACTCTC
259 CACGAGGACTTCCCAGAGGTCACCCATCCTAGTACTACTCTC
*
293 GCCCAAGCACGCTT-ACTGCGTAGTTCTGATGGGATCCGG-GCATTAGTGCTGGTATGATCGCAC
1 GCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCAC
* *
356 CCGTCAACTCTTGCGCAATCTATTCATATAAAGG--CCCC-TATCGCACTTGCGCCTCGAATTTG
66 CCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTCCCCTTATCACACTTGCGCCTCGAATTTA
* * *
418 AATACAATTTCGACCAAATATCGTTCCAAAATATTTATTTCACAAAACGCAAAAAAACGAATGAG
131 AATACAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGC-AAATAACGAATGAG
* *
483 TTACACCACGTGGAGAAAACGCAAC--AAAAAACATTCTATGAAATAAAATGGGAGGGGTGCAAC
195 TTACACCACGTGGAGAAAACGCAACAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAAC
546 ACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTACTCTC
260 ACGAGGACTTCCCA-GAGGTCACCCATCCTAGTACTACTCTC
*
588 GCCCAAGCACGCTTAACTGCGAAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCAC
1 GCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCAC
653 CCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCACACTTGCGCCTCGAATTT
66 CCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT-CCCCTTATCACACTTGCGCCTCGAATTT
* *
718 CAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAG
130 AAATACAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAG
*
783 TTACACCACGTGGTGAAAACGCAACAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAAC
195 TTACACCACGTGGAGAAAACGCAACAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAAC
848 ACGAGGACTTCCCAAGAGGTCACCCATCCTAGTACTACTCTC
260 ACGAGGACTTCCC-AGAGGTCACCCATCCTAGTACTACTCTC
*
890 GCCCAAGCACGCTTAACTGCGGATTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCAC
1 GCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCAC
*
955 CCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTCGAATTT
66 CCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT-CCCCTTATCACACTTGCGCCTCGAATTT
1020 AAATACAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAG
130 AAATACAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAG
* *
1085 TTACACCACGTGGAGAAAACGCAACAAAAAAAACATTCTATGAAATAAAATGGGAGGGGTGCAAC
195 TTACACCACGTGGAGAAAACGCAACAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAAC
* *
1150 ACGAGGACTTCTCAGGAGGTCACCCATCCTAATACTACTC-C
260 ACGAGGACTTCCCA-GAGGTCACCCATCCTAGTACTACTCTC
1191 -CCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCAC
1 GCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCAC
*
1255 CCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTACCCATTATCACACTTGCGCCTCGAATTT
66 CCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT-CCCCTTATCACACTTGCGCCTCGAATTT
* * * *
1320 AAATGCAAATTCGACCAAATATCATTCCAAATTATTTATTTCACAAAACACAAATAACGACTGAG
130 AAATACAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAG
1385 TTACACCACGTGGAGAAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAA
195 TTACACCACGTGGAGAAAACGCAAC-AAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAA
1450 CACGAGGACTTCCCAGAGGTCACCCATCCTAGTACTACTCTC
259 CACGAGGACTTCCCAGAGGTCACCCATCCTAGTACTACTCTC
1492 GCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCAC
1 GCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCAC
*
1557 CCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTACCCCTTATCGCACTTGCGCCTCGAATTT
66 CCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT-CCCCTTATCACACTTGCGCCTCGAATTT
1622 AAATACAAATTCGACCAAA
130 AAATACAAATTCGACCAAA
1641 AAAAACATTC
Statistics
Matches: 1280, Mismatches: 45, Indels: 36
0.94 0.03 0.03
Matches are distributed among these distances:
288 12 0.01
289 37 0.03
290 12 0.01
291 82 0.06
292 58 0.05
293 23 0.02
294 24 0.02
295 41 0.03
296 24 0.02
297 58 0.05
300 276 0.22
301 123 0.10
302 509 0.40
303 1 0.00
ACGTcount: A:0.32, C:0.25, G:0.19, T:0.24
Consensus pattern (300 bp):
GCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCAC
CCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTCCCCTTATCACACTTGCGCCTCGAATTTA
AATACAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGT
TACACCACGTGGAGAAAACGCAACAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACA
CGAGGACTTCCCAGAGGTCACCCATCCTAGTACTACTCTC
Found at i:1807 original size:228 final size:227
Alignment explanation
Indices: 1411--1868 Score: 844
Period size: 228 Copynumber: 2.0 Consensus size: 227
1401 AAACGCAACT
*
1411 AAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGAGGTCACCCA
1 AAAAAAAACATTATATGAAACAAAATGGGAGGGGCGCAACACGAGGACTTCCCAGAGGTCACCCA
1476 TCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGT
66 TCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGT
*
1541 GCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTACCCCTTATCGCA
131 GCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTACCCCTTATCACA
1606 CTTGCGCCTCGAATTTAAATACAAATTCGACC
196 CTTGCGCCTCGAATTTAAATACAAATTCGACC
* *
1638 AAAAAAAACATTCTATGAAATAAAATGGGAGGGGCGCAACACGAGGACTTCCCAGGAGGTCACCC
1 AAAAAAAACATTATATGAAACAAAATGGGAGGGGCGCAACACGAGGACTTCCCA-GAGGTCACCC
*
1703 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGTAGTTCTGATGGGATCCGGTGCATTAG
65 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
*
1768 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCAC
130 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTACCCCTTATCAC
*
1833 ACTTGCGCCTCGAATTTAAATGCAAATTCGACC
195 ACTTGCGCCTCGAATTTAAATACAAATTCGACC
1866 AAA
1 AAA
1869 TATCGTTCCA
Statistics
Matches: 223, Mismatches: 7, Indels: 1
0.97 0.03 0.00
Matches are distributed among these distances:
227 51 0.23
228 172 0.77
ACGTcount: A:0.29, C:0.26, G:0.20, T:0.24
Consensus pattern (227 bp):
AAAAAAAACATTATATGAAACAAAATGGGAGGGGCGCAACACGAGGACTTCCCAGAGGTCACCCA
TCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGT
GCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTACCCCTTATCACA
CTTGCGCCTCGAATTTAAATACAAATTCGACC
Found at i:2216 original size:529 final size:528
Alignment explanation
Indices: 1109--2691 Score: 2875
Period size: 529 Copynumber: 3.0 Consensus size: 528
1099 GAAAACGCAA
*
1109 CAAAAAAAACATTCTATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCTCAGGAGGTCACC
1 CAAAAAAAACATTCTATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACC
*
1174 CATCCTAATACTACTC-C-CCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTA
66 CATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTA
* *
1237 GTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTACCCATTATCA
131 GTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCA
*
1302 CACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCATTCCAAATTATTTATTTCACAAA
196 CACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAA
*
1367 AC-ACAAATAACGACTGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAAACATTATATGAAA
261 ACGA-AAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT-AAAAAAACATTATATGAAA
1431 CAAAATGGGAGGGGTGCAACACGAGGACTTCCC-AGAGGTCACCCATCCTAGTACTACTCTCGCC
324 CAAAATGGGAGGGGTGCAACACGAGGACTTCCCAAGAGGTCACCCATCCTAGTACTACTCTCGCC
1495 CAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCG
389 CAAGCACGCTT-ACTGC-GAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCG
1560 TCAACTCTTGCGCAATCTATTCATATAAAGGCTACCCCTTATCGCACTTGCGCCTCGAATTTAAA
452 TCAACTCTTGCGCAATCTATTCATATAAAGGCTACCCCTTATCGCACTTGCGCCTCGAATTTAAA
1625 TACAAATTCGAC
517 TACAAATTCGAC
*
1637 CAAAAAAAACATTCTATGAAATAAAATGGGAGGGGCGCAACACGAGGACTTCCCAGGAGGTCACC
1 CAAAAAAAACATTCTATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACC
*
1702 CATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGTAGTTCTGATGGGATCCGGTGCATTA
66 CATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTA
1767 GTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCA
131 GTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCA
1832 CACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAA
196 CACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAA
*
1897 ACGAAAATAACGAATGGGTTACACCACGTGGAGAAAACGCAACTAAAAAAA-ATTATATGAAACA
261 ACGAAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATTATATGAAACA
* *
1961 AAATGGGAGGGGTG-AACCACAAGGACTTCCCAAGAGGTCACCCATCCTAGTACTACTATCGCCC
326 AAATGGGAGGGGTGCAA-CACGAGGACTTCCCAAGAGGTCACCCATCCTAGTACTACTCTCGCCC
2025 AAGCACGCTTAGCTGCGTAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGT
390 AAGCACGCTTA-CTGCG-AGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGT
2090 CAACTCTTGCGCAATCTATTCATATAAAGGCTACCCCTTATCGCACTTGCGCCTCGAATTTAAAT
453 CAACTCTTGCGCAATCTATTCATATAAAGGCTACCCCTTATCGCACTTGCGCCTCGAATTTAAAT
2155 ACAAATTCGAC
518 ACAAATTCGAC
2166 CAAAAAAAACATTCTATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACC
1 CAAAAAAAACATTCTATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACC
2231 CATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTA
66 CATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTA
*
2296 GTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATTA
131 GTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCA
2361 CACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAA
196 CACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAA
*
2426 ACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATTATATG-AA-A
261 ACGAAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATTATATGAAACA
*
2489 AAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTACTCTCG-CCA
326 AAATGGGAGGGGTGCAACACGAGGACTTCCCAAGAGGTCACCCATCCTAGTACTACTCTCGCCCA
2553 AGCACGCTTACTGCGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAA
391 AGCACGCTTACTGCGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAA
* *
2618 CTCTTGCGCAATCTATTCATAT-AAGGCTGCCCCTTAT--CACTTGCGCCTCGAATTTAAATGCA
456 CTCTTGCGCAATCTATTCATATAAAGGCTACCCCTTATCGCACTTGCGCCTCGAATTTAAATACA
2680 AATTCGAC
521 AATTCGAC
2688 CAAA
1 CAAA
2692 TATCGTTCCA
Statistics
Matches: 1025, Mismatches: 21, Indels: 24
0.96 0.02 0.02
Matches are distributed among these distances:
522 36 0.04
524 14 0.01
525 72 0.07
526 5 0.00
527 15 0.01
528 176 0.17
529 486 0.47
530 220 0.21
531 1 0.00
ACGTcount: A:0.31, C:0.25, G:0.19, T:0.24
Consensus pattern (528 bp):
CAAAAAAAACATTCTATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACC
CATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTA
GTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCA
CACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAA
ACGAAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATTATATGAAACA
AAATGGGAGGGGTGCAACACGAGGACTTCCCAAGAGGTCACCCATCCTAGTACTACTCTCGCCCA
AGCACGCTTACTGCGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAA
CTCTTGCGCAATCTATTCATATAAAGGCTACCCCTTATCGCACTTGCGCCTCGAATTTAAATACA
AATTCGAC
Found at i:2349 original size:228 final size:227
Alignment explanation
Indices: 1941--2397 Score: 790
Period size: 228 Copynumber: 2.0 Consensus size: 227
1931 AAACGCAACT
1941 AAAAAAAATTATATGAAACAAAATGGGAGGGGTGAACCACAAGGACTTCCCAAGAGGTCACCCAT
1 AAAAAAAATTATATGAAACAAAATGGGAGGGGTGAACCACAAGGACTTCCCAAGAGGTCACCCAT
* *
2006 CCTAGTACTACTATCGCCCAAGCACGCTTAGCTGCGTAGTTCTGATGGGATCCGGTGCATTAGTG
66 CCTAGTACTACTATCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTG
*
2071 CTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTACCCCTTATCGCAC
131 CTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTACCCCTTATCACAC
2136 TTGCGCCTCGAATTTAAATACAAATTCGACCA
196 TTGCGCCTCGAATTTAAATACAAATTCGACCA
* * * *
2168 AAAAAAACATTCTATGAAATAAAATGGGAGGGGTGCAA-CACGAGGACTTCCCAGGAGGTCACCC
1 AAAAAAA-ATTATATGAAACAAAATGGGAGGGGTG-AACCACAAGGACTTCCCAAGAGGTCACCC
*
2232 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
64 ATCCTAGTACTACTATCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
* *
2297 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATTAC
129 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTACCCCTTATCAC
*
2362 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCA
194 ACTTGCGCCTCGAATTTAAATACAAATTCGACCA
2396 AA
1 AA
2398 TATCGTTCCA
Statistics
Matches: 217, Mismatches: 11, Indels: 3
0.94 0.05 0.01
Matches are distributed among these distances:
227 7 0.03
228 208 0.96
229 2 0.01
ACGTcount: A:0.30, C:0.26, G:0.20, T:0.24
Consensus pattern (227 bp):
AAAAAAAATTATATGAAACAAAATGGGAGGGGTGAACCACAAGGACTTCCCAAGAGGTCACCCAT
CCTAGTACTACTATCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTG
CTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTACCCCTTATCACAC
TTGCGCCTCGAATTTAAATACAAATTCGACCA
Found at i:3035 original size:301 final size:302
Alignment explanation
Indices: 2167--4483 Score: 4316
Period size: 301 Copynumber: 7.7 Consensus size: 302
2157 AAATTCGACC
*
2167 AAAAAAAACATTCTATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
1 AAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
2232 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
66 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
*
2297 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATTAC
131 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCAC
2362 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
196 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
2427 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT
261 CGCAAATAACGAATGAGTTA-ACCACGTGGAGAAAACGCAACT
2470 -AAAAAAACATTATATG-AA-AAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
1 AAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
2532 ATCCTAGTACTACTCTCG-CCAAGCACGCTT-ACTGC-GAGTTCTGATGGGATCCGGTGCATTAG
66 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
2594 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATAT-AAGGCTGCCCCTTAT--C
131 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCAC
2656 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
196 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
2721 CGCAAATAACGAATGAGTT-ACCACGTGGAGAAAACGCAACT
261 CGCAAATAACGAATGAGTTAACCACGTGGAGAAAACGCAACT
*
2762 AAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
1 AAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
2827 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
66 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
*
2892 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGC
131 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCAC
2957 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
196 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
3022 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAAC-
261 CGCAAATAACGAATGAGTTA-ACCACGTGGAGAAAACGCAACT
*
3064 -AAAAAAACATTCTATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
1 AAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
3128 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
66 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
3193 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCAC
131 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCAC
3258 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
196 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
3323 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT
261 CGCAAATAACGAATGAGTTA-ACCACGTGGAGAAAACGCAACT
*
3366 AAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
1 AAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
*
3431 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGC-GAGTTATGATGGGATCCGGTGCATTAG
66 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
3495 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-CCCTTAT--C
131 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCAC
3557 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
196 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
3622 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAAC-
261 CGCAAATAACGAATGAGTTA-ACCACGTGGAGAAAACGCAACT
3664 -AAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
1 AAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
3728 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
66 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
*
3793 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCATTATCAC
131 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCAC
3858 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
196 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
3923 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT
261 CGCAAATAACGAATGAGTTA-ACCACGTGGAGAAAACGCAACT
3966 AAAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTT-CCAGGAGGTCACC
1 -AAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACC
4030 CATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTA
65 CATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTA
*
4095 GTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTAT-G
130 GTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCA
4159 CACTTGCGCCTCGAA-TTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAA
195 CACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAA
4223 ACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT
260 ACGCAAATAACGAATGAGTTA-ACCACGTGGAGAAAACGCAACT
*
4267 AAAAAAAACATTATATGAAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACC
1 AAAAAAAACATTATATG-AAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACC
4332 CATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTA
65 CATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTA
*
4397 GTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCG
130 GTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCA
4462 CACTTGCGCCTCGAATTTAAAT
195 CACTTGCGCCTCGAATTTAAAT
4484 TACAAAATCG
Statistics
Matches: 1977, Mismatches: 13, Indels: 47
0.97 0.01 0.02
Matches are distributed among these distances:
292 22 0.01
293 16 0.01
294 87 0.04
295 62 0.03
296 27 0.01
297 178 0.09
298 158 0.08
299 141 0.07
300 79 0.04
301 625 0.32
302 251 0.13
303 276 0.14
304 55 0.03
ACGTcount: A:0.32, C:0.25, G:0.20, T:0.24
Consensus pattern (302 bp):
AAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCAC
ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
CGCAAATAACGAATGAGTTAACCACGTGGAGAAAACGCAACT
Found at i:4671 original size:230 final size:231
Alignment explanation
Indices: 4267--4713 Score: 860
Period size: 230 Copynumber: 1.9 Consensus size: 231
4257 AAACGCAACT
4267 AAAAAAAACATTATATGAAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACC
1 AAAAAAAACATTATATGAAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACC
4332 CATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTA
66 CATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTA
4397 GTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCG
131 GTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCG
4462 CACTTGCGCCTCGAATTTAAATTACAAAATCGACAC
196 CACTTGCGCCTCGAATTTAAATTACAAAATCGACAC
* *
4498 AAAAAAAACATTCTATG-AAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACC
1 AAAAAAAACATTATATGAAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACC
4562 CATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTA
66 CATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTA
4627 GTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCG
131 GTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCG
*
4692 GACTTGCGCCTCGAATTTAAAT
196 CACTTGCGCCTCGAATTTAAAT
4714 GCAAATTCGA
Statistics
Matches: 213, Mismatches: 3, Indels: 1
0.98 0.01 0.00
Matches are distributed among these distances:
230 197 0.92
231 16 0.08
ACGTcount: A:0.29, C:0.26, G:0.21, T:0.24
Consensus pattern (231 bp):
AAAAAAAACATTATATGAAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACC
CATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTA
GTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCG
CACTTGCGCCTCGAATTTAAATTACAAAATCGACAC
Found at i:5905 original size:302 final size:302
Alignment explanation
Indices: 5024--9503 Score: 8499
Period size: 301 Copynumber: 14.9 Consensus size: 302
5014 CAAATTCGCC
5024 AAAAAAAACATT-TATGAAATAAAATGGGA-GGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
1 AAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
5087 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGC-GAGTTCTGATGGGATCCGGTGCATTAG
66 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
*
5151 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAGTCTATTCATATAAAGGCTGCCCCTTAT--C
131 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-CCCTTATCGC
5214 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
195 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
5279 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT
260 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT
*
5322 AAAAAAAACATTATATGAAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACC
1 AAAAAAAACATTATATG-AAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACC
5387 CATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTA
65 CATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTA
5452 GTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCTTAT--C
130 GTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCTTATCGC
5515 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
195 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
*
5580 CGCAAATAACGAATGAGTTACACCACGCGGAGAAAACGCAACT
260 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT
*
5623 AAAAAAAACATTATATGAAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACC
1 AAAAAAAACATTATATG-AAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACC
5688 CATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTA
65 CATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTA
5753 GTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT-CCCTTATCGC
130 GTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCTTATCGC
5817 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
195 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
5882 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAAC-
260 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT
5924 -AAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
1 AAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
5988 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
66 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
*
6053 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT-CCCATTATCAC
131 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCC-TTATCGC
6117 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
195 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
6182 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT
260 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT
6225 AAAAAAAACATTATATG-AA-AAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
1 AAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
6288 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
66 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
*
6353 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT-CCCATTATCAC
131 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCC-TTATCGC
6417 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
195 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
*
6482 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAGC-
260 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT
*
6524 AAAAAAAACATTCTATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
1 AAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
6589 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
66 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
*
6654 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCAC
131 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-CCCTTATCGC
6719 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
195 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
6784 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT
260 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT
*
6827 AAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
1 AAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
6892 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
66 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
6957 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGC
131 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-CCCTTATCGC
7022 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
195 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
7087 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAAC-
260 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT
7129 -AAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
1 AAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
7193 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
66 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
7258 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCTTATCGCA
131 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCTTATCGCA
7323 CTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAAC
196 CTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAAC
7388 GCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT
261 GCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT
7430 -AAAAAAACATTATATG-AA-AAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
1 AAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
7492 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
66 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
7557 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGC
131 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-CCCTTATCGC
7622 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
195 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
7687 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT
260 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT
7730 -AAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
1 AAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
7794 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
66 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
*
7859 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT-CCCATTATCAC
131 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCC-TTATCGC
7923 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
195 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
7988 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT
260 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT
* *
8031 AAAAAAAACATTATATGAAAACAAAATGGGAGGGGTGCAAGACGAGGACTTCCCAGGAGGTCACC
1 AAAAAAAACATTATATG-AAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACC
8096 CATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTA
65 CATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTA
8161 GTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCG
130 GTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-CCCTTATCG
8226 CACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAA
194 CACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAA
8291 ACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT
259 ACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT
8335 AAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
1 AAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
8400 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
66 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
*
8465 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT-CCCATTATCAC
131 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCC-TTATCGC
8529 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
195 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
8594 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT
260 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT
8637 -AAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCA-GAGGTCACCC
1 AAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
8700 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
66 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
8765 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGC
131 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-CCCTTATCGC
8830 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
195 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
8895 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT
260 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT
8938 AAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
1 AAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
9003 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
66 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
9068 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCTTATCGCA
131 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCTTATCGCA
9133 CTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAAC
196 CTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAAC
9198 GCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT
261 GCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT
*
9240 -AAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
1 AAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
9304 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
66 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
*
9369 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCAC
131 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-CCCTTATCGC
9434 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
195 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCAC-AAA
9499 ACGCA
259 ACGCA
9504 CCACGTAAAA
Statistics
Matches: 4129, Mismatches: 23, Indels: 55
0.98 0.01 0.01
Matches are distributed among these distances:
298 12 0.00
299 351 0.09
300 813 0.20
301 1200 0.29
302 852 0.21
303 767 0.19
304 131 0.03
305 3 0.00
ACGTcount: A:0.32, C:0.25, G:0.19, T:0.24
Consensus pattern (302 bp):
AAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCTTATCGCA
CTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAAC
GCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT
Found at i:8997 original size:603 final size:605
Alignment explanation
Indices: 5024--9503 Score: 8582
Period size: 603 Copynumber: 7.4 Consensus size: 605
5014 CAAATTCGCC
*
5024 AAAAAAAACATT-TATGAAATAAAATGGGA-GGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
1 AAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
5087 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGC-GAGTTCTGATGGGATCCGGTGCATTAG
66 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
*
5151 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAGTCTATTCATATAAAGGCTGCCCCTTAT--C
131 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGC
5214 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
196 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
*
5279 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAAACATTATATGAAAAC
261 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAAACATTATATG-AAAT
5344 AAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTACTCTCGCCC
325 AAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTACTCTCGCCC
5409 AAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGT
390 AAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGT
5474 CAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCTTAT--CACTTGCGCCTCGAATTTAAATG
455 CAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCTTATCACACTTGCGCCTCGAATTTAAATG
5537 CAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACA
520 CAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACA
*
5602 CCACGCGGAGAAAACGCAACT
585 CCACGTGGAGAAAACGCAACT
5623 AAAAAAAACATTATATGAAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACC
1 AAAAAAAACATTATATG-AAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACC
5688 CATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTA
65 CATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTA
5753 GTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT--CCCTTATCG
130 GTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCG
5816 CACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAA
195 CACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAA
5881 ACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAAC--AAAAAAACATTATATGAAAT
260 ACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAAACATTATATGAAAT
5944 AAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTACTCTCGCCC
325 AAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTACTCTCGCCC
6009 AAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGT
390 AAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGT
6074 CAACTCTTGCGCAATCTATTCATATAAAGGCT-CCCATTATCACACTTGCGCCTCGAATTTAAAT
455 CAACTCTTGCGCAATCTATTCATATAAAGGCTGCCC-TTATCACACTTGCGCCTCGAATTTAAAT
6138 GCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTAC
519 GCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTAC
6203 ACCACGTGGAGAAAACGCAACT
584 ACCACGTGGAGAAAACGCAACT
6225 AAAAAAAACATTATATG-AA-AAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
1 AAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
6288 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
66 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
* *
6353 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT-CCCATTATCAC
131 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGC
6417 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
196 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
* *
6482 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAGC-AAAAAAAACATTCTATGAAATA
261 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAAACATTATATGAAATA
6546 AAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTACTCTCGCCCA
326 AAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTACTCTCGCCCA
6611 AGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTC
391 AGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTC
6676 AACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCACACTTGCGCCTCGAATTTAAATG
456 AACTCTTGCGCAATCTATTCATATAAAGGCTG-CCCTTATCACACTTGCGCCTCGAATTTAAATG
6741 CAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACA
520 CAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACA
6806 CCACGTGGAGAAAACGCAACT
585 CCACGTGGAGAAAACGCAACT
6827 AAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
1 AAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
6892 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
66 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
6957 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGC
131 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGC
7022 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
196 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
7087 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAAC--AAAAAAACATTATATGAAATA
261 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAAACATTATATGAAATA
7150 AAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTACTCTCGCCCA
326 AAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTACTCTCGCCCA
7215 AGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTC
391 AGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTC
*
7280 AACTCTTGCGCAATCTATTCATATAAAGGCTGCCCTTATCGCACTTGCGCCTCGAATTTAAATGC
456 AACTCTTGCGCAATCTATTCATATAAAGGCTGCCCTTATCACACTTGCGCCTCGAATTTAAATGC
7345 AAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACAC
521 AAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACAC
7410 CACGTGGAGAAAACGCAACT
586 CACGTGGAGAAAACGCAACT
7430 -AAAAAAACATTATATG-AA-AAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
1 AAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
7492 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
66 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
7557 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGC
131 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGC
7622 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
196 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
7687 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT-AAAAAAACATTATATGAAATA
261 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAAACATTATATGAAATA
7751 AAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTACTCTCGCCCA
326 AAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTACTCTCGCCCA
7816 AGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTC
391 AGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTC
7881 AACTCTTGCGCAATCTATTCATATAAAGGCT-CCCATTATCACACTTGCGCCTCGAATTTAAATG
456 AACTCTTGCGCAATCTATTCATATAAAGGCTGCCC-TTATCACACTTGCGCCTCGAATTTAAATG
7945 CAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACA
520 CAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACA
8010 CCACGTGGAGAAAACGCAACT
585 CCACGTGGAGAAAACGCAACT
*
8031 AAAAAAAACATTATATGAAAACAAAATGGGAGGGGTGCAAGACGAGGACTTCCCAGGAGGTCACC
1 AAAAAAAACATTATATG-AAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACC
8096 CATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTA
65 CATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTA
8161 GTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCG
130 GTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCG
8226 CACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAA
195 CACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAA
8291 ACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAAACATTATATGAAAT
260 ACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAAACATTATATGAAAT
8356 AAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTACTCTCGCCC
325 AAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTACTCTCGCCC
8421 AAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGT
390 AAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGT
8486 CAACTCTTGCGCAATCTATTCATATAAAGGCT-CCCATTATCACACTTGCGCCTCGAATTTAAAT
455 CAACTCTTGCGCAATCTATTCATATAAAGGCTGCCC-TTATCACACTTGCGCCTCGAATTTAAAT
8550 GCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTAC
519 GCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTAC
8615 ACCACGTGGAGAAAACGCAACT
584 ACCACGTGGAGAAAACGCAACT
*
8637 -AAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCA-GAGGTCACCC
1 AAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
8700 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
66 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
8765 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGC
131 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGC
8830 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
196 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
8895 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAAACATTATATGAAATA
261 CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAAACATTATATGAAATA
8960 AAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTACTCTCGCCCA
326 AAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTACTCTCGCCCA
9025 AGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTC
391 AGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTC
*
9090 AACTCTTGCGCAATCTATTCATATAAAGGCTGCCCTTATCGCACTTGCGCCTCGAATTTAAATGC
456 AACTCTTGCGCAATCTATTCATATAAAGGCTGCCCTTATCACACTTGCGCCTCGAATTTAAATGC
9155 AAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACAC
521 AAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACAC
9220 CACGTGGAGAAAACGCAACT
586 CACGTGGAGAAAACGCAACT
9240 -AAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
1 AAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
9304 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
66 ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
*
9369 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCAC
131 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGC
9434 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
196 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCAC-AAA
9499 ACGCA
260 ACGCA
9504 CCACGTAAAA
Statistics
Matches: 3835, Mismatches: 20, Indels: 46
0.98 0.01 0.01
Matches are distributed among these distances:
599 177 0.05
600 573 0.15
601 514 0.13
602 360 0.09
603 906 0.24
604 584 0.15
605 420 0.11
606 301 0.08
ACGTcount: A:0.32, C:0.25, G:0.19, T:0.24
Consensus pattern (605 bp):
AAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCC
ATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAG
TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGC
ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAA
CGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAAACATTATATGAAATA
AAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTACTCTCGCCCA
AGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCACCCGTC
AACTCTTGCGCAATCTATTCATATAAAGGCTGCCCTTATCACACTTGCGCCTCGAATTTAAATGC
AAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACAC
CACGTGGAGAAAACGCAACT
Found at i:10423 original size:302 final size:302
Alignment explanation
Indices: 9765--13058 Score: 6207
Period size: 302 Copynumber: 10.9 Consensus size: 302
9755 TTTATTTCAC
*
9765 AAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACAAGGACTTCCCA
1 AAAACGCAACT-AAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
*
9830 AGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
65 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
9895 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
130 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
*
9960 CCCCTTATCGACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATT
195 CCCCTTATC-AGACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATT
10025 TATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
259 TATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
*
10069 AAAACGCAACTAAAAAAACATTATATGAAAAAAAATGGGAGGGGTGCAACACGAGGACTTCCCAG
1 AAAACGCAACTAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAG
10134 GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCC
66 GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCC
10199 GGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGC
131 GGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGC
10264 CCCTTATCAGACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTA
196 CCCTTATCAGACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTA
10329 TTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
261 TTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
10371 AAAACGCAACTAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAG
1 AAAACGCAACTAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAG
10436 GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCC
66 GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCC
10501 GGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGC
131 GGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGC
* *
10566 CCATTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTA
196 CCCTTATCAGACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTA
10631 TTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
261 TTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
*
10673 AAAACGCAACTAAAAAAAACATTATATGAACCAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
1 AAAACGCAACT-AAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
10738 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
65 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
10803 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
130 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
10868 -CCCTTATC-GCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATT
195 CCCCTTATCAG-ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATT
10931 TATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
259 TATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
*
10975 AAAACGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAG
1 AAAACGCAACTAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAG
11040 GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCC
66 GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCC
11105 GGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGC
131 GGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGC
11170 CCCTTATC-GCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
196 CCCTTATCAG-ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
11234 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
260 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
*
11277 AAAACGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAG
1 AAAACGCAACTAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAG
11342 GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCC
66 GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCC
11407 GGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGC
131 GGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGC
11472 CCCTTATC-GCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
196 CCCTTATCAG-ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
11536 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
260 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
*
11579 AAAACGCAACTAAAAAAAACATTATATGAAAACAAAATGGGAGGGGTGCAAGACGAGGACTTCCC
1 AAAACGCAACT-AAAAAAACATTATATG-AAACAAAATGGGAGGGGTGCAACACGAGGACTTCCC
11644 A-GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGAT
64 AGGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGAT
11708 CCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT
129 CCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT
* *
11773 -CCCATTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATT
194 GCCCCTTATCAGACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATT
11837 TATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
259 TATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
*
11881 AAAACGCAAC-AAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAG
1 AAAACGCAACTAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAG
* *
11945 GAGGTCACCCATCCTAGTACTA-TCCTCTCCCAAGCACGCTTAACTGCGGAGTTCTAATGGGATC
66 GAGGTCACCCATCCTAGTACTACT-CTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
12009 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
130 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
*
12074 CCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
195 CCCCTTATCAGACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
12139 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
260 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
12182 AAAACGCAACTAAAAAAACATTATATGAAACAAAATGGG-GGGGTGCAACACGAGGACTTCCCAG
1 AAAACGCAACTAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAG
12246 GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCC
66 GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCC
12311 GGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGC
131 GGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGC
12376 CCCTTATC-GCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
196 CCCTTATCAG-ACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
*
12440 ATTTCACAAAACGCAAATAACGAATGAGTTACACCATGTGGAG
260 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
* * *
12483 AAAACGCAAC-AAAAAAACATTATATGCAATAAAACGGGAGGGGTGCAACACGAGGACTTCCCAG
1 AAAACGCAACTAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAG
12547 GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCC
66 GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCC
12612 GGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-
131 GGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGC
12676 CCCTTATCAGACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTA
196 CCCTTATCAGACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTA
12741 TTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
261 TTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
*
12783 AAAACGCAACTAAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
1 AAAACGCAACT-AAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
12848 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
65 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
12913 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
130 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
*
12978 CCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
195 CCCCTTATCAGACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
13043 ATTTCACAAAACGCAA
260 ATTTCACAAAACGCAA
13059 CTAAAAAAAA
Statistics
Matches: 2940, Mismatches: 33, Indels: 35
0.98 0.01 0.01
Matches are distributed among these distances:
299 36 0.01
300 279 0.09
301 718 0.24
302 1267 0.43
303 594 0.20
304 46 0.02
ACGTcount: A:0.32, C:0.25, G:0.19, T:0.24
Consensus pattern (302 bp):
AAAACGCAACTAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAG
GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCC
GGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGC
CCCTTATCAGACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTA
TTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
Found at i:11069 original size:604 final size:605
Alignment explanation
Indices: 9765--33552 Score: 16330
Period size: 604 Copynumber: 39.0 Consensus size: 605
9755 TTTATTTCAC
*
9765 AAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACAAGGACTTCCCA
1 AAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
*
9830 AGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
66 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
9895 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
131 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
9960 CCCCTTATCGACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATT
196 CCCCTTATC-ACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATT
10025 TATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACAT
260 TATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACAT
*
10090 TATATGAAAAAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACT
325 TATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACT
10155 ACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGA
390 ACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGA
10220 TCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCAG-ACTTGCGCCT
455 TCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATC-GCACTTGCGCCT
10284 CGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAAC
519 CGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAAC
10349 GAATGAGTTACACCACGTGGAG
584 GAATGAGTTACACCACGTGGAG
10371 AAAACGCAACT-AAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
1 AAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
10435 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
66 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
10500 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
131 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
*
10565 CCCATTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
196 CCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
10630 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAAACAT
261 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT-AAAAAAACAT
**
10695 TATATGAACCAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACT
325 TATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACT
10760 ACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGA
390 ACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGA
10825 TCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-CCCTTATCGCACTTGCGCCTC
455 TCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTC
10889 GAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACG
520 GAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACG
10954 AATGAGTTACACCACGTGGAG
585 AATGAGTTACACCACGTGGAG
*
10975 AAAACGCAACT-AAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
1 AAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
11039 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
66 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
11104 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
131 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
*
11169 CCCCTTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
196 CCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
11234 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATT
261 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATT
11299 ATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTA
326 ATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTA
11364 CTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGAT
391 CTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGAT
11429 CGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTCG
456 CGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTCG
11494 AATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGA
521 AATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGA
11559 ATGAGTTACACCACGTGGAG
586 ATGAGTTACACCACGTGGAG
*
11579 AAAACGCAACTAAAAAAAACATTATATGAAAACAAAATGGGAGGGGTGCAAGACGAGGACTTCCC
1 AAAACGCAACTAAAAAAAACATTATATG-AAACAAAATGGGAGGGGTGCAACACGAGGACTTCCC
11644 A-GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGAT
65 AGGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGAT
11708 CCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT
130 CCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT
*
11773 -CCCATTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATT
195 GCCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATT
11837 TATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAAC-AAAAAAACAT
260 TATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACAT
11901 TATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACT
325 TATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACT
* *
11966 A-TCCTCTCCCAAGCACGCTTAACTGCGGAGTTCTAATGGGATCCGGTGCATTAGTGCTGGTATG
390 ACT-CTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATG
*
12030 ATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCACACTTGCGCCT
454 ATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCT
12095 CGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAAC
519 CGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAAC
12160 GAATGAGTTACACCACGTGGAG
584 GAATGAGTTACACCACGTGGAG
12182 AAAACGCAACT-AAAAAAACATTATATGAAACAAAATGGG-GGGGTGCAACACGAGGACTTCCCA
1 AAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
12245 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
66 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
12310 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
131 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
*
12375 CCCCTTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
196 CCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
*
12440 ATTTCACAAAACGCAAATAACGAATGAGTTACACCATGTGGAGAAAACGCAAC-AAAAAAACATT
261 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATT
* *
12504 ATATGCAATAAAACGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTA
326 ATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTA
12569 CTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGAT
391 CTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGAT
12634 CGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-CCCTTATCAG-ACTTGCGCCTC
456 CGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATC-GCACTTGCGCCTC
12697 GAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACG
520 GAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACG
12762 AATGAGTTACACCACGTGGAG
585 AATGAGTTACACCACGTGGAG
*
12783 AAAACGCAACTAAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
1 AAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
12848 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
66 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
12913 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
131 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
12978 CCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
196 CCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
* ** * * * ** **** *
13043 ATTTCACAAAACGCAACTAAAAAAAACATTA-TATGAAACAAAATGG-GAGGGGTGCAAC-ACAA
261 ATTTCACAAAACGC-A--AATAACGA-ATGAGT-T-ACACCACGTGGAGA-AAACGCAACTAAAA
** ** * ** ** *** * * * ** * * * * *
13105 GGAC-TTCCCAAGAGGTCACCCATCCTA---GTACTACTC-TCG-C--CCAAGCACGCTTA-AC-
319 AAACATT-ATATGAAAT-A-AAATGGGAGGGGTGCAACACGAGGACTTCCCAGGA-GGTCACCCA
** * ** * ** * * * * * *
13160 TGCGGAGTTCTGA-T-GGGATCC--G-GTGCATT-AGTGCTG-G-TATGATCGCA-CCCGT-CAA
380 T-CCTAGTACT-ACTCTCG-CCCAAGCACGC-TTAACTGCGGAGTTCTGATGGGATCCGGTGC-A
* * * * * * * * * * * * * *
13215 CTCTTGCGCAAT-CTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGC-CTCGAATTTAAATG
440 -T-TAGTGC--TGGTA-T--GAT---CGC-ACCCGTCA--ACTCTTGCGCAATC-TATTCATAT-
** *** * *** * * ** ** *
13278 CAAATTC-GACCAAATATCG---TTCCAAAT-TATTTATTTCACAAAACGC-AA-TAAAAAAAAC
490 -AAAGGCTG-CCCCTTATCGCACTTGCGCCTCGA---ATTT----AAATGCAAATTCGACCAAAT
* ** ** ** ** * * * * ** * * *
13336 AT-TTATGAAAAAAATGGGAGGGGT-GCAACACG-AGGACT-TCCCAGGAGGT-CACCCATCCT-
546 ATCGT-TCCAAATTAT-TTA--TTTCACAAAACGCA--AATAACGAATGAGTTACA-CCA-CGTG
13395 -AG
603 GAG
** * * **** ** * ** ** ** ** *
13397 TACTACTC-TCGCCCAAGCACGCTTA-ACTGCGGAGTTC-TGATGGGATCCGGTGCATTA-G-TG
1 -AAAACGCAACTAAAAAAAAC-ATTATA-T---GA-AACAAAATGGGA-GGGGTGCAACACGAGG
*** * * * * * ** ** * **
13457 -C-TGGTATGATCG-CACCCGT-C-A--ACT-CT-T-GCGCAATCTATTCATATAAAGGCTG-CC
58 ACTTCCCAGGA-GGTCACCCATCCTAGTACTACTCTCGCCCAAGC-ACGC-T-TAACTGCGGAGT
* * *** * * * ** * *
13511 CCTTATCACACTTGCGCCT-CAAATTTAAATGC--AAAT--TCG-A-CC--AAATATCGTT-C-C
119 TCTGATGGGA--TCCG-GTGC--A-TT-AGTGCTGGTATGATCGCACCCGTCAA-CTC-TTGCGC
* * ** *** * * * * * * * ** *
13565 AAAT-TATTTATTTCACAAAAC-G-CAAATAACGAATGAGTTACACCACGTGGA-GAAAACGC-A
175 -AATCTATTCATAT-A-AAGGCTGCCCCTTATC--A-CACTTGCGCCTC--GAATTTAAATGCAA
* * ** * ** ** ** ** ** * * * * ** * *
13625 ACT-AAAAAAACATTATATGAAAAAAATGGGAGGGGT-GCAACACG-AGGACT-TCCCAGGAGGT
232 ATTCGACCAAATATCGT-TCCAAATTAT-TTA--TTTCACAAAACGCA--AATAACGAATGAGTT
* * ** ** * ** * ** ** ** *** **
13686 -CACCCATCCTAGTACTACTCTCGCCCAAGCACGC-TTA-ACTGCGGAGTTCTGATGGGATCCGG
291 ACA-CCA-CGT-GGAGAAAACGCAACTAAAAAAACATTATA-T---GAAATAAAATGGGA-GGGG
** * *** * * * * * **
13748 TGCATTA-G-TG-C-TGGTATGATCG-CACCCGT-C-A--ACT-CT-T-GCGCAATCTATTCATA
348 TGCAACACGAGGACTTCCCAGGA-GGTCACCCATCCTAGTACTACTCTCGCCCAAGC-ACGC-T-
** * *** * **** * * * * ** * *
13801 TAAAGGCTG-CCCCTTATCACTTGCGCCTCGAATTTAAATGC--AAAT--TCG-A-CC--AAATA
409 TAACTGCGGAGTTCTGATGGGATCCG-GT-GCA-TT-AGTGCTGGTATGATCGCACCCGTCAA-C
* * ** *** * * * * * * * *
13857 TCGTT-C-CAAAT-TATTTATTTCACAAAAC-G-CAAATAACGAATGAGTTACACCACGTGGA-G
469 TC-TTGCGC-AATCTATTCATAT-A-AAGGCTGCCCCTTATCG---CACTTGCGCCTC--GAATT
* * * * ** * ** ** ** ** ** * * * *
13916 AAAACGC-AACT-AAAAAAACATTATATGAAAAAAATGGGAGGGGT-GCAACACG-AGGACT-TC
525 TAAATGCAAATTCGACCAAATATCGT-TCCAAATTAT-TTA--TTTCACAAAACGCA--AATAAC
** * * *
13976 CCAGGAGGT-CACCCATCCT--AG
584 GAATGAGTTACA-CCA-CGTGGAG
** * * **** ** * ** ** ** ** *
13997 TACTACTC-TCGCCCAAGCACGCTTA-ACTGCGGAGTTC-TGATGGGATCCGGTGCATTA-G-TG
1 -AAAACGCAACTAAAAAAAAC-ATTATA-T---GA-AACAAAATGGGA-GGGGTGCAACACGAGG
*** * * * * * ** * ** *
14057 -C-TGGTATGATCG-CACCCGT-C-A--ACT-CT-T-GCGCAATCTATTCATATAA-AG-GCTGC
58 ACTTCCCAGGA-GGTCACCCATCCTAGTACTACTCTCGCCCAAGC-ACGC-T-TAACTGCGGAGT
* * * * * * * * ** * *
14110 CCTTATCGCACTTGCGCCTCGAATTTAAATGC--AAAT--TCG-A-CC--AAATATCGTT-C-CA
119 TCTGATGGGA--TCCG-GT-GCA-TT-AGTGCTGGTATGATCGCACCCGTCAA-CTC-TTGCGC-
* * ** *** * * * * * * * ** *
14165 AAT-TATTTATTTCACAAAAC-G-CAAATAACGAATGAGTTACACCACGTGGA-GAAAACGC-AA
175 AATCTATTCATAT-A-AAGGCTGCCCCTTATC--A-CACTTGCGCCTC--GAATTTAAATGCAAA
* ** ** * *** ** ** * * * * ** *
14225 CTAAAAAAACATTATATGAAACAAA--ATGGGAGGGGT-GCAACACG-AGGACT-TCCCA-GAGG
233 TTCGACCAA-A-TAT-CGTTCCAAATTAT-TTA--TTTCACAAAACGCA--AATAACGAATGAGT
* ** ** * * *** ** * ** ** *** **
14284 T-CACC-CATTCTAGTACTACTC-TCGCCCAAGCACGCTTAGCTGCGGAGTTCTGATGGGATCCG
290 TACACCAC-GTGGAG-AAAACGCAAC-TAAAAAAAC-ATTA--T-ATGAAATAAAATGGGA-GGG
** * * * *** * * * ****
14346 GTGCATTAGTGCTGGTA-TGATCGCA-CCCGTCAACTCTTGCGC-AAT-CTA-T-TCATATAAAG
347 GTGCAACA-CG-AGG-ACT--TCCCAGGAGGTC-ACCCAT-C-CTAGTACTACTCTC-GCCCAA-
* * * * ** * ** * * ***
14405 GCTGCCCTTATCACTTGCGCCTCGAATT-TAAATGCAAATTC-GACCAAATATCGTTCCAAATTA
402 GC-ACGCTTA--AC-TGCG----GAGTTCT-GATG-GGATCCGGTGC--AT-TAG-TGC-TGGTA
* * ** * **** * * * * ** *** * *
14468 TTTATTTCACAAAAACG-CAA--CGTAAAAAAACATTATATGAAAAAAATGGGAG-GGGTGAACA
452 -TGA--TCGC--ACCCGTCAACTCTTGCGCAATC--TAT-TCATATAAA-GGCTGCCCCT-TA-T
* * ** * * * * * ** * *
14529 CGAGGACTTCCCAGGGTC-ACCCATCCT-AGTACTACTCTCG-CCAAGCA-CGCTT--AACTGCG
506 C--GCACTT-GC-GCCTCGA---AT-TTAAATGCAAAT-TCGACCAAATATCG-TTCCAAAT--T
*** **** * * * ** ** *
14588 AGTTCTGATGGGATC-CGGTGC-ATTAGTGCTGGTATGA-TCGCACC-CGTCAACT
559 A-TT-T-ATTTCA-CAAAACGCAAATA--AC--GAATGAGTTACACCACGTGGA-G
**** ** **** * * ** *** ** ** *
14640 CTTGCGCAATCTATTCATATAAAGGC-TGCCCCT-TATCACACTTGCGCCTCGAATTTAA-ATGC
1 AAAACGCAA-CTA---A-A-AAAAACAT-TATATGAAACA-AAATG-G-GAGGGGTGCAACACG-
* * * ** * * * * * ** * * *****
14702 A--AATTCGACCA--A-AT-ATCGTTCCAAATTATTTA-TTTCACAAAACGCA-ACTAAAAAAAA
55 AGGACTTC--CCAGGAGGTCACCCATCC-TAGTA-CTACTCTCGCCCAA-GCACGCTTAACTGCG
* * * ** ** * *** * * *
14759 CATTATATGAAACAAAATGGGA-GGGGTGCAACACGAGGACTTCCCAGGA-GGTCACCCATCCTA
115 GAGT-TCTG-------ATGGGATCCGGTGCATTA-G-TG-C-TGGTATGATCG-CACCCGT-C-A
* * ** *** * * **** * * *
14822 GTACTACTCTCGCCCAAGC-ACGC-T-T-AA--CTGCGAGTTCTGATGGGATCCG-GT-GCA-TT
165 --ACT-CT-T-GCGCAATCTATTCATATAAAGGCTGCCCCTTATCA-CACTTGCGCCTCGAATTT
* ** * * * * *** *
14878 -AGTGCTGGTATGATCGCACCCGTCAA-CTC-TTGCGC-AATCTATTCATAT-A-ATGGCTGCCC
224 AAATGC--AAAT--TCG-A-CC--AAATATCGTT-C-CAAAT-TATTTATTTCACAAAAC-G-CA
* * * * * * * * ** * * * ** * ** *
14937 ATTATC--A-CACTTGCGCCTC--GAATTTAAATGCAAATTCGACCAAATATCGT-TCCAAATTA
276 AATAACGAATGAGTTACACCACGTGGA-GAAAACGC-AACT-AAAAAAACATTATAT-GAAA-TA
** *** ***** * * * *** * * ** **
14996 TTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCA-ACTAAAAAAA
336 -AAATGGGA-GGGGTGC-AA-CACG-AGGACTT-C-CCA---GGAGGTCACCCATCCTAGTACTA
* * ** * * * * * * * ** * *
15060 CATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA-GGAGGTCAC---CCATCC
391 C--TCT-CG---CCCAA--GCA-CGCT-TAAC-TGCGGAGTTCTGATGG-GATC-CGGTGCAT--
* ** * ** * * * ** ** * **
15121 TAGTACTACTCTCGCCCAAGCACGC-TTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGC
441 TAGTGCTGGTAT-GATC--GCACCCGTCAACT-C-----T-TG-CGCAAT-CTATTCA-TA-TAA
* * ** * * * * * *
15185 TGGTATGATCGCACC-CGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCTTATCCACTT
492 AGG-CTG--C-C-CCTTATC-GCACTTGCGC-CTCGA---ATTTAAA---TG--C--A---AATT
* * * * * **
15249 GCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCA
537 -CGAC-C-AA---ATAT-C--GTTCCA-AATT--------------ATTTATTTCACAAAACGCA
15314 AATAACGAATGAGTTACACCACGTGGAG
578 AATAACGAATGAGTTACACCACGTGGAG
* *
15342 AAAACGCAAC--AAAAAAACATTCTATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
1 AAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
15405 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
66 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
15470 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
131 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
15535 -CCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
196 CCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
15599 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATT
261 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATT
*
15664 ATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTA
326 ATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTA
15729 CTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGAT
391 CTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGAT
* *
15794 CGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCATTATCACACTTGCGCCTCG
456 CGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTCG
15859 AATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGA
521 AATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGA
15924 ATGAGTTACA-CACGTGGAG
586 ATGAGTTACACCACGTGGAG
* *
15943 AAAACGCAAC--AAAAAAACATTCTATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
1 AAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
16006 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
66 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
*
16071 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTT
131 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
* *
16136 CCCC-T-TCTCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAATTATCGTTCCAAATTATTT
196 CCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
* * *
16199 ATTTCAC-AAACAGTAAATAACGAATAAGTTACACCACGTGGAGAAAACGGAACTAAAAAAAACA
261 ATTTCACAAAAC-GCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT-AAAAAAACA
*
16263 TTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA-GAGGTCACCCATCCTAGTAC
324 TTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTAC
16327 TACTCTCGCCCAAGCACGCTTAACT--GGAGTTCTGAT-GGATCCGGTGCATTAGTGCTGGTATG
389 TACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATG
*
16389 ATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGGACTTGCGCCT
454 ATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCT
*
16454 CGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAACTATTTATTTCACAAAACGC-AATAAC
519 CGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAAC
16518 GAAT-AGTTACA-CAC--GG-G
584 GAATGAGTTACACCACGTGGAG
*
16535 AAAACGCAACT---AAAAACATTATATGAAAC-AAA-GGGAGGGGTGCAACACGAGGACTTCCAA
1 AAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
** * * * *
16595 GGAGGTCACCCATCCTAGTACTATCGTTCCAAATTATTTATTTCACAA-AACGCAAATAAC-GAA
66 GGAGGTCACCCATCCTAGTACTA-C--T-C----------TCGCCCAAGCACGC--TTAACTG-C
* ** * ** * * * ** * * ***
16658 TGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATTA-T-ATGAAATAAAATGGGAGGGG
114 GGAGTT-C-TGA--TGG-G--ATC-C-GGT------GCATTAGTGCTG--GTATGATCGCACCCG
* * * ** **
16721 TGCAACAC--GAG-GA-C--TTCCCA-GGAGG-T-CACCCATCCTAGT-ACTACTCT-CGCC-CA
162 T-CAACTCTTGCGCAATCTATTCATATAAAGGCTGC-CCC-T--TA-TCAC-ACT-TGCGCCTC-
** * * * **** * * * * * **
16774 AGCACGCTTAACTGCGGAGTTCTGATGGGAT-CCGGTGC--ATTAGTGCTGGTATGATCGC-ACC
218 -G-A-ATTTAAATGC-AAATTC-GACCAAATATCGTTCCAAATTA-T--T--TAT-TTCACAAAA
* ** * * ** * ***** * *******
16835 CGTCAACTCTTGCGCAATCTA-TTCATATAAAGGCTGCCCTTATCGC-ACTTGCGCCTCGAATTT
272 CG-CAA--ATAACG-AAT-GAGTT-ACA-CCACG-TGGAGAAAACGCAACTAAAAAAAC--A-TT
* ** * * ** ** * * ** * *** *
16898 AAATGCAAATTCGACCAAAT---ATCGTTCCAA-ATTATTTATTTCACAAAACG-CAAATAACGA
326 ATATG-AAA-T--A--AAATGGGAGGGGTGCAACACGA-GGACTTCCCAGGAGGTCACCCATC--
* * * *** * * *** ** *** **
16958 ATGAGTTAC-ACCACGTGGAGAAAACGCA-ACTAAAAAAACATTATATGAAATAAAATGGGA-GG
382 CT-AG-TACTA-CTC-TCG-CCCAA-GCACGCT----TAAC--T-GCGGAGTTCTGATGGGATCC
* ** *** * * * * * **
17020 GGTAAAACACGAG-GACTTCCCAGGA-GGTCACCCATCCTAGTACTACTCTCGCCCAAGC-ACGC
434 GGT---GCATTAGTG-C-TGGTATGATCG-CACCCGT-C-A--ACT-CT-T-GCGCAATCTATTC
** *** * * * * * * * **
17082 -T-TAACTGC-GAGTTCTGATGGGA--TCCG-GT-GCA-TT-AGTGCTGGTATGATCGCACCCGT
486 ATATAAAGGCTG-CCCCTTATCGCACTTGCGCCTCGAATTTAAATGC--AAAT--TCG-A-CC--
* * * * ** *** * * * *
17138 CAA-CTC-TTGCGC-AATCTATTCATAT-A-AAGGCTGCCCTTATCGCACTTGCGCCT-CGA--A
542 AAATATCGTT-C-CAAAT-TATTTATTTCACAAAAC-GCAAATAACG-A-ATGAG-TTAC-ACCA
** **
17195 TTTAAATG
599 CGTGGA-G
* * ***** *** * * ** *
17203 CAAATTCGACCAAATATCGTTCCAA-ATTATTTATTTCACAAAA-CGCA--AAT--AACGAATGA
1 -AAA-ACG--CAACTA--AAAAAAACATTA--TATGAAACAAAATGGGAGGGGTGCAAC--ACGA
* * * *** * * ** ** ** * ** * * * *
17262 GTTAC-ACCCGTGGAGAAAACGCA-ACTAAAAAAACAT-T---ATATG-A-AATAAAATGGAGGG
56 G-GACTTCCC-AGGAGGTCACCCATCCTAGTACTAC-TCTCGCCCAAGCACGCTTAACT-GCGGA
* ** * * ** * * * * *
17319 GTGCAAACGAGGACTTCCCAGGAGGTCACCCA-TCCTAGTACT-ACTCTCGCCCAAGCACTTAAC
117 GTTCTGATG-GGA--T-CC-GG-TG-CA-TTAGTGCTGGTA-TGA-TCGCACCC--G---TCAAC
* ** ** * *** * ** *
17382 TGCGGAGTTCTGATGGGATCCGTGCATTAGTGCTGGTATGATCGCACC-CGTCAACTCTTGCGCA
167 T-C-----T-TG-CGCAATCTATTCA-TA-TAAAGG-CTG--C-C-CCTTATC-ACACTTGCGC-
* * * * * * *** * **
17446 ATC-TATTATATAAGGCTGCCCCTTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAA
215 CTCGAATT-TA-AA---TG---C--A----AATT-CGAC-CAAATATCGTTCCAAATT--A--TT
17510 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
260 TAT--TT-C--A------------CAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
17575 CGCAACTAAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAG
308 CGCAACT-AAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAG
17640 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGT
372 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGT
17705 GCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCC
437 GCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCC
*
17770 ATATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTT
502 TTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTT
17835 CACAAAACGCAAATAACGAATGAGTT-CACCACGTGGAG
567 CACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
* * **
17873 AAAACGCAACT-AAAAAAACATTATATGAAATAAAAGGGGAGGGGTAAAACACGAGGACTTCCCA
1 AAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
17937 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
66 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
18002 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
131 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
*
18067 CCCCTTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
196 CCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
18132 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATT
261 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATT
* ** *
18197 ATATGAAATAAAAGGGGAGGGGTAAAACGCGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTA
326 ATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTA
18262 CTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGAT
391 CTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGAT
18327 CGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTCG
456 CGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTCG
18392 AATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGA
521 AATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGA
18457 ATGAGTTACACCACGTGGAG
586 ATGAGTTACACCACGTGGAG
* *
18477 AAAACGCAACTAAAAAAAACATTATATGAAATAAAAAGGGAGGGGTGCAACACGAGGACTTCCCA
1 AAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
18542 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGAAT-GGAT
66 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTG-ATGGGAT
18606 CCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT
130 CCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT
*
18671 GCCCCTTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATT
195 GCCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATT
18736 TATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG-AAACGCAACTAAAAAAAACA
260 TATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT-AAAAAAACA
18800 TTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTAC
324 TTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTAC
18865 TACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATG
389 TACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATG
18930 ATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCT
454 ATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCT
18995 CGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAAC
519 CGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAAC
19060 GAATGAGTT-CAACCACGTGGAG
584 GAATGAGTTAC-ACCACGTGGAG
*
19082 AAAACGCAACT-AAAAAAACATTATATGAAA-AAAA-GGGA-GGG-GCAA-ACG-GGACATCCCA
1 AAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
19140 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
66 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
19205 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
131 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
*
19270 -CCCTTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
196 CCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
19334 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATT
261 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATT
19399 ATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTA
326 ATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTA
19464 CTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGAT
391 CTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGAT
*
19529 CGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCACACTTGCGCCTCG
456 CGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTCG
19594 AATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGA
521 AATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGA
19659 ATGAGTTACACCACGTGGAG
586 ATGAGTTACACCACGTGGAG
*
19679 AAAACGCAACT-AAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
1 AAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
19743 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
66 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
19808 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
131 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
*
19873 -CCCTTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
196 CCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
19937 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATT
261 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATT
20002 ATATGAAATAAAAT-GGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTA
326 ATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTA
20066 CTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGAT
391 CTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGAT
*
20131 CGCACCCGTCTACTCTTGCGCAATCTATTCATATAAAGGCT-CCCCTTATCGCACTTGCGCCTCG
456 CGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTCG
*
20195 AATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCAAAAAACGCAAATAACGA
521 AATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGA
20260 ATGAGTTACACCACGTGGAG
586 ATGAGTTACACCACGTGGAG
*
20280 AAAACGCAACT--AAAAAA-ATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
1 AAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
20342 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
66 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
20407 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
131 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
*
20472 -CCCTTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
196 CCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
20536 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT-AAAAAACATT
261 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATT
20600 ATATGAAATAAAA-GGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTA
326 ATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTA
20664 CTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGAT
391 CTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGAT
20729 CGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTCG
456 CGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTCG
*
20794 AATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAATGA
521 AATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGA
*
20859 ATGAGTTACACCACGTGCAG
586 ATGAGTTACACCACGTGGAG
* *
20879 AAAACGCAACTAAAACAAACATTATATGAAATAAAAT-------G-G------GA-G--------
1 AAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
* * * *
20921 GGAGGTCACCCATCCTAGTACTACTTTCGCCGAAGCACGTTTAACTGCGGAGTTTTGATGGGATC
66 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
20986 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
131 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
*
21051 -CCCTTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
196 CCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
21115 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATT
261 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATT
21180 ATATGAAATAAAA-GGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTA
326 ATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTA
21244 CTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGAT
391 CTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGAT
21309 CGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-CCCTTATCGCACTTGCGCCTCG
456 CGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTCG
21373 AATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGA
521 AATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGA
21438 ATGAGTTACACCACGTGGAG
586 ATGAGTTACACCACGTGGAG
*
21458 AAAACGCAACT-AAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
1 AAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
21522 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
66 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
21587 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
131 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
*
21652 CCCCTTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
196 CCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
21717 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATT
261 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATT
21782 ATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTA
326 ATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTA
21847 CTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGAT
391 CTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGAT
21912 CGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTCG
456 CGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTCG
21977 AATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGA
521 AATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGA
22042 ATGAGTTACACCACGTGGAG
586 ATGAGTTACACCACGTGGAG
*
22062 AAAACGCAACTAAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
1 AAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
22127 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
66 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
22192 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
131 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
*
22257 -CCCTTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
196 CCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
22321 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATT
261 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATT
22386 ATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTA
326 ATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTA
22451 CTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGAT
391 CTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGAT
22516 CGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTCG
456 CGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTCG
22581 AATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGA
521 AATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGA
22646 ATGAGTTACACCACGTGGAG
586 ATGAGTTACACCACGTGGAG
*
22666 AAAACGCAAACTAAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCC
1 AAAACGC-AACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCC
22731 AGGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGC-GAGTTCTGATGGGAT
65 AGGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGAT
22795 CCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT
130 CCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT
*
22860 GCCCCTTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATT
195 GCCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATT
22925 TATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACAT
260 TATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACAT
22990 TATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACT
325 TATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACT
23055 ACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGA
390 ACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGA
23120 TCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-CCCTTATCGCACTTGCGCCTC
455 TCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTC
23184 GAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACG
520 GAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACG
23249 AATGAGTTACACCACGTGGAG
585 AATGAGTTACACCACGTGGAG
*
23270 AAAACGCAACT-AAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
1 AAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
23334 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
66 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
23399 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
131 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
*
23464 CCCCTTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
196 CCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
23529 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAAACAT
261 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT-AAAAAAACAT
*
23594 TATATGAAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTAC
325 TATATG-AAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTAC
23659 TACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATG
389 TACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATG
23724 ATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCT
454 ATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCT
*
23789 CGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCAAAAAACGCAAATAAC
519 CGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAAC
23854 GAATGAGTTACACCACGTGGAG
584 GAATGAGTTACACCACGTGGAG
*
23876 AAAACGCAACTAAAAAAAAACATT-TAATGAAATAAAA-GGGAGGGGTGCAACACGAGGACTTCC
1 AAAACGCAACT-AAAAAAAACATTAT-ATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCC
23939 CAGGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGC-GAGTTCTGATGGGA
64 CAGGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGA
24003 TCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGC
129 TCCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGC
24068 TG-CCCTTAT--CACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTAT
194 TGCCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTAT
24130 TTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAA-A
259 TTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACA
24194 TTATATGAAA-AAAATGGGAGGGGTGCAACAC-AGGACTTCCCA-GAGGTCACCCATCCTAGTAC
324 TTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTAC
*
24256 TACTCTCGCCCAAGCACGCTTAACTGC-G-GTTCTGATGGGATCCGGTGCATTAGTGTTGGTATG
389 TACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATG
*
24319 ATCGCACCCGTCAACTCTTGCGCAATCTATTTATATAAAGGCTGCCCCTTATCGCACTTGCGCCT
454 ATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCT
* * * * ** * ** ** *
24384 CGAAATTTTAAATACAAATTCGACCCAAAAAAAACATTTATGAAATAAAATGGGAGGGGT-GCAA
519 CG-AA-TTTAAATGCAAATTCGA-CC--AAATATC-GTT-CCAAAT--TAT-TTA--TTTCACAA
* * * ** * * *
24448 CACG-AGGACT-TCCCAGGAGTCAC-CCATCCT--AG
572 AACGCA--AATAACGAATGAGTTACACCA-CGTGGAG
** * * **** ** * ** ** ** ** *
24480 TACTACTC-TCGCCCAAGCACGCTTA-ACTGCGGAGTTC-TGATGGGATCCGGTGCATTA-G-TG
1 -AAAACGCAACTAAAAAAAAC-ATTATA-T---GA-AACAAAATGGGA-GGGGTGCAACACGAGG
*** * * * * * ** **
24540 -C-TGGTATGATCG-CACCCGT-C-A--ACT-CT-T-GCGCAATCTATTCATATAAGGCTGC-CC
58 ACTTCCCAGGA-GGTCACCCATCCTAGTACTACTCTCGCCCAAGC-ACGC-T-TAA--CTGCGGA
* ** * * * ** * *
24594 TTATCACACTTGCG--CC--TCGAATTTAAATGC--AAAT--TCG-A-CC--AAATATCGTT-C-
117 GT-TCTGA--TGGGATCCGGT-GCA-TT-AGTGCTGGTATGATCGCACCCGTCAA-CTC-TTGCG
* * ** *** * * * * * * * ** *
24645 CAAAT-TATTTATTTCACAAAAC-G-CAAATAACGAATGAGTTACACCACGTGGA-GAAAACGC-
174 C-AATCTATTCATAT-A-AAGGCTGCCCCTTATC--A-CACTTGCGCCTC--GAATTTAAATGCA
* * ** * ** * * ** ** * * * * ** *
24705 AACT-AAAAAAACATTATAT-GAAATAAAATGGGAGGGGT-GCAACACG-AGGACT-TCCCAGGA
231 AATTCGACCAAATATCGT-TCCAAAT--TAT-TTA--TTTCACAAAACGCA--AATAACGAATGA
* * * ** ** * ** * ** ** ** *** **
24765 GGT-CACCCATCCTAGTACTACTCTCGCCCAAGCACGC-TTA-ACTGCGAGTTCTGATGGGATCC
288 GTTACA-CCA-CGT-GGAGAAAACGCAACTAAAAAAACATTATA-T--GAAATAAAATGGGA-GG
** * *** * * * * * **
24827 GGTGCATTA-G-TG-C-TGGTATGATCG-CACCCGT-C-A--ACT-CT-T-GCGCAATCTATTCA
346 GGTGCAACACGAGGACTTCCCAGGA-GGTCACCCATCCTAGTACTACTCTCGCCCAAGC-ACGC-
* ** ** * *** * * * * ** *
24880 TATAA-AG-GCTGCCCTTATCACACTTGCGCCTCGAATTTAAATGC--AAAT--TCG-A-CC--A
408 T-TAACTGCGGAGTTCTGATGGGA--TCCG-GT-GCA-TT-AGTGCTGGTATGATCGCACCCGTC
* * * ** *** * * * * * *
24935 AATATCGTT-C-CAAAT-TATTTATTTCACAAAAC-G-CAAATAACGAATGAGTTACACCACGTG
466 AA-CTC-TTGCGC-AATCTATTCATAT-A-AAGGCTGCCCCTTATCG---CACTTGCGCCTC--G
* ** * * ** ** * ** * * ** ** * *
24995 GA-GAAAACGC-AACTAAAAAAAACATTATAT-GAAATAAAATGGGAGGGGT-GCAACACG-AGG
521 AATTTAAATGCAAATTCGACCAAATATCGT-TCCAAAT--TAT-TTA--TTTCACAAAACGCA--
* * ** * * *
25055 ACT-TCCCAGGAGGT-CACCCATCCT--AG
578 AATAACGAATGAGTTACA-CCA-CGTGGAG
** * * **** ** * ** ** ** ** *
25081 TACTACTC-TCGCCCAAGCACGCTTA-ACTGCGGAGTTC-TGATGGGATCCGGTGCATTA-G-TG
1 -AAAACGCAACTAAAAAAAAC-ATTATA-T---GA-AACAAAATGGGA-GGGGTGCAACACGAGG
*** * * * * * ** ** * **
25141 -C-TGGTATGATCG-CACCCGT-C-A--ACT-CT-T-GCGCAATCTATTCATATAAAGGCTG-CC
58 ACTTCCCAGGA-GGTCACCCATCCTAGTACTACTCTCGCCCAAGC-ACGC-T-TAACTGCGGAGT
* * * * * * * * ** * *
25195 CCTTATCGCACTTGCGCCTCGAATTTAAATGC--AAAT--TCG-A-CC--AAATATCGTT-C-CA
119 TCTGATGGGA--TCCG-GT-GCA-TT-AGTGCTGGTATGATCGCACCCGTCAA-CTC-TTGCGC-
* * * * **** * * * * * * * *
25250 AAT-TATTTATTTCACAA-ACAG-TAAATAACGAATGAGTTACACCAC-AGA---AAACGC-AAC
175 AATCTATTCATAT-A-AAGGCTGCCCCTTATC--A-CACTTGCGCCTCGA-ATTTAAATGCAAAT
* ** * * ** ** ** * * * * ** * *
25307 T-AAAAAAATTAT--AT-GAAAAAATGGGAGGGGT-GCAACACG-AGGACT-TCCCAGGAGGT-C
234 TCGACCAAA-TATCGTTCCAAATTAT-TTA--TTTCACAAAACGCA--AATAACGAATGAGTTAC
* * ** ** * ** * ** ** ** *** **
25364 ACCCATCCTAGTACTACTCTCGCCCAAGCACGC-TTA-ACTGCGGAGTTCTGATGGGATCCGGTG
293 A-CCA-CGT-GGAGAAAACGCAACTAAAAAAACATTATA-T---GAAATAAAATGGGA-GGGGTG
** * *** * * * * * **
25427 CATTA-G-TG-C-TGGTATGATCG-CACCCGT-C-A--ACT-CT-T-GCGCAATCTATTCATATA
350 CAACACGAGGACTTCCCAGGA-GGTCACCCATCCTAGTACTACTCTCGCCCAAGC-ACGC-T-TA
* ** ** * *** * * * * ** * *
25480 A-AG-GCTGCCCTTATCACACTTGCGCCTCGAATTTAAATGC--AAAT--TCG-A-CC--AAATA
411 ACTGCGGAGTTCTGATGGGA--TCCG-GT-GCA-TT-AGTGCTGGTATGATCGCACCCGTCAA-C
* * ** *** * * * * * * * *
25535 TCGTT-C-CAAAT-TATTTATTTCACAAAAC-G-CAAATAACGAATGAGTTACACCACGTGGA-G
469 TC-TTGCGC-AATCTATTCATAT-A-AAGGCTGCCCCTTATCG---CACTTGCGCCTC--GAATT
* * * ** ** * *** ** ** * * *
25594 AAAACGC-AACTAAAAAAACATTATATGAAACAAA--ATGGGAGGGGT-GCAACACG-AGGACT-
525 TAAATGCAAATTCGACCAA-A-TAT-CGTTCCAAATTAT-TTA--TTTCACAAAACGCA--AATA
* ** * *
25653 TCCCA-GAGGT-CACCCATCCT--AG
582 ACGAATGAGTTACA-CCA-CGTGGAG
** * * **** ** * ** ** ** ** *
25675 TACTACTC-TCGCCCAAGCACGCTTA-ACTGCGGAGTTC-TGATGGGATCCGGTGCATTA-G-TG
1 -AAAACGCAACTAAAAAAAAC-ATTATA-T---GA-AACAAAATGGGA-GGGGTGCAACACGAGG
*** * * * * * ** ** **
25735 -C-TGGTATGATCG-CACCCGT-C-A--ACT-CT-T-GCGCAATCTATTCATATAAAGGCTGCCG
58 ACTTCCCAGGA-GGTCACCCATCCTAGTACTACTCTCGCCCAAGC-ACGC-T-TAACTGC-GGAG
* * * * * * * ** * *
25790 --CTTATCGCACTTGCGCCTCGAATTTAAATGC--AAAT--TCG-A-CC--AAATATCGTT-C-C
118 TTCTGATGGGA--TCCG-GT-GCA-TT-AGTGCTGGTATGATCGCACCCGTCAA-CTC-TTGCGC
* * ** *** * * * * * * * ** *
25843 AAAT-TATTTATTTCACAAAAC-G-CAAATAACGAATGAGTTACACCACGTGGA-GAAAACGC-A
175 -AATCTATTCATAT-A-AAGGCTGCCCCTTATC--A-CACTTGCGCCTC--GAATTTAAATGCAA
* ** * ** * * ** ** * * * * ** *
25903 A--CAAAAAAACATTATAT-GAAATAAAATGGGAGGGGT-GCAACACG-AGGACT-TCCCAGGAG
232 ATTCGACCAAATATCGT-TCCAAAT--TAT-TTA--TTTCACAAAACGCA--AATAACGAATGAG
* * * ** ** * ** * ** ** ** *** **
25962 GT-CACCCATCCTAGTACTACTCTCGCCCAAGCACGC-TTA-ACTGCGGAGTTCTGATGGGATCC
289 TTACA-CCA-CGT-GGAGAAAACGCAACTAAAAAAACATTATA-T---GAAATAAAATGGGA-GG
** * *** * * * * * **
26024 GGTGCATTA-G-TG-C-TGGTATGATCG-CACCCGT-C-A--ACT-CT-T-GCGCAATCTATTCA
346 GGTGCAACACGAGGACTTCCCAGGA-GGTCACCCATCCTAGTACTACTCTCGCCCAAGC-ACGC-
* *** * * * * **
26077 TAAAGGCTGC-CCTTATCTCACTTGCG--CC--TCGAATTTAAATGC--AAAT--TCG-A-CC--
408 TTAA--CTGCGGAGT-TCTGA--TGGGATCCGGT-GCA-TT-AGTGCTGGTATGATCGCACCCGT
* * * * ** ***** ** * * * * *
26129 AAATATCGTT-C-CAAAT-TATTTATTTCACAAAACAAATAACGAAT-G-AGTTACACCACGTGG
465 CAA-CTC-TTGCGC-AATCTATTCATAT-A-AAGGC-TGCCCCTTATCGCACTTGCGCCTC--GA
** * * *** ** * *** ** ** * *
26189 A-GAAAACGCAACTAAAAAAAACATTATATGAAACAAA--ATGGGAGGGGT-GCAACACG-AGGA
522 ATTTAAATGCAAATTCGACCAA-A-TAT-CGTTCCAAATTAT-TTA--TTTCACAAAACGCA--A
* * ** * * *
26249 CT-TCCCAGGAGGT-CACCCATCCT--AG
579 ATAACGAATGAGTTACA-CCA-CGTGGAG
** * * **** ** * *** ** ** ** *
26274 TACTACTC-TCGCCCAAGCACGCTTA-ACTGCGGTTC-TGATGGGATCCGGTGCATTA-G-TG-C
1 -AAAACGCAACTAAAAAAAAC-ATTATA-T--GAAACAAAATGGGA-GGGGTGCAACACGAGGAC
*** * * * * * ** ** * ***
26333 -TGGTATGATCG-CACCCGT-C-A--ACT-CT-T-GCGCAATCTATTCATATAAAGGCTG-CCCC
60 TTCCCAGGA-GGTCACCCATCCTAGTACTACTCTCGCCCAAGC-ACGC-T-TAACTGCGGAGTTC
* * * * * * * ** * *
26388 TTATCGCACTTGCGCCTCGAATTTAAATGC--AAAT--TCG-A-CC--AAATATCGTT-C-CAAA
121 TGATGGGA--TCCG-GT-GCA-TT-AGTGCTGGTATGATCGCACCCGTCAA-CTC-TTGCGC-AA
* * ** *** * * * * * * * ** *
26443 T-TATTTATTTCACAAAAC-G-CAAATAACGAATGAGTTACACCACGTGGA-GAAAACGC-AA--
177 TCTATTCATAT-A-AAGGCTGCCCCTTATC--A-CACTTGCGCCTC--GAATTTAAATGCAAATT
* ** * ** * * ** ** * * * * ** * *
26501 CAAAAAAAACATTATAT-GAAATAAAATGGGAGGGGT-GCAACACG-AGGACT-TCCCAGGAGGT
235 C-GACCAAATATCGT-TCCAAAT--TAT-TTA--TTTCACAAAACGCA--AATAACGAATGAGTT
* * ** ** * ** * ** ** ** *** **
26562 -CACCCATCCTAGTACTACTCTCGCCCAAGCACGC-TTA-ACTGCGGAGTTCTGATGGGATCCGG
291 ACA-CCA-CGT-GGAGAAAACGCAACTAAAAAAACATTATA-T---GAAATAAAATGGGA-GGGG
** * *** * * * * * **
26624 TGCATTA-G-TG-C-TGGTATGATCG-CACCCGT-C-A--ACT-CT-T-GCGCAATCTATTCATA
348 TGCAACACGAGGACTTCCCAGGA-GGTCACCCATCCTAGTACTACTCTCGCCCAAGC-ACGC-T-
** * *** * * * * * * * ** *
26677 TAAAGGCTG-CCCCTTATCGCACTTGCGCCTCGAATTTAAATGC--AAAT--TCG-A-CC--AAA
409 TAACTGCGGAGTTCTGATGGGA--TCCG-GT-GCA-TT-AGTGCTGGTATGATCGCACCCGTCAA
* * * ** *** * * * * * * *
26733 TATCGTT-C-CAAAT-TATTTATTTCACAAAAC-G-CAAATAACGAATGAGTTACACCACGTGGA
468 -CTC-TTGCGC-AATCTATTCATAT-A-AAGGCTGCCCCTTATCG---CACTTGCGCCTC--GAA
** * * ** ** * *** ** ** * * *
26793 -GAAAACGC-AACTAAAAAAACATTATATGAAACAAA--ATGGGAGGGGT-GCAACACG-AGGAC
523 TTTAAATGCAAATTCGACCAA-A-TAT-CGTTCCAAATTAT-TTA--TTTCACAAAACGCA--AA
* ** * * *
26852 T-TCCCAGGAGGT-CACCCATCCT--AG
580 TAACGAATGAGTTACA-CCA-CGTGGAG
** * * **** ** * ** ** ** ** *
26876 TACTACTC-TCGCCCAAGCACGCTTA-ACTGCGGAGTTC-TGATGGGATCCGGTGCATTA-G-TG
1 -AAAACGCAACTAAAAAAAAC-ATTATA-T---GA-AACAAAATGGGA-GGGGTGCAACACGAGG
*** * * * * * ** ** * **
26936 -C-TGGTATGATCG-CACCCGT-C-A--ACT-CT-T-GCGCAATCTATTCATATAAAGGCTG-CC
58 ACTTCCCAGGA-GGTCACCCATCCTAGTACTACTCTCGCCCAAGC-ACGC-T-TAACTGCGGAGT
* * * * * * * * * * ****
26990 CCTTATCGCACTTGCGCCTCGAATTTAAATAC--ATAT--TCG-ACCAAAAAAAACATTCTATGA
119 TCTGATGGGA--TCCG-GT-GCA-TT-AGTGCTGGTATGATCGCACC--CGTCAAC--TCT-TG-
*** ** * * * * *** * *
27050 AATAAAATGGGAGGGTGCA-ACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTACTCTCG
172 --CGCAAT-CTA---TTCATATA-AAGG-CTGCCCCTTA--TCA--CA--CT--TGC-GC-CTCG
* * * * *** * * * *
27114 CCCAAGCACGCTTAACTGCGGAGTTCTGA--ATGGATCCGGTGC--ATTAGTGCTGGTATGATCG
219 ----A--A--TTTAAATGC-AAATTC-GACCAAATAT-CGTTCCAAATTA-T--T--TAT-TTCA
** * * ** * * ** ** * ** *
27175 C-ACCCGTTAACTCTTGCGCAATCTA-TT-CA-TA--T--A-AAGGCTGCCCCTTATCACAC-TT
267 CAAAACG-CAA--ATAACG-AAT-GAGTTACACCACGTGGAGAAAAC-GCAACTAAAAAAACATT
*** * * * ** * * * ** * ** **
27230 GCGCCTCGAATTTAAAT-GCA--AATTCGAC-CAAATATCGTTCCAAATTATTTATTTCACAAAA
326 --ATAT-GAAATAAAATGGGAGGGGTGCAACACGAGGA-C-TTCC----CA-GGAGGTCAC----
* * * *** * * *** **
27291 CGCAAATAACGAATGAGTTAC-ACCACGTGGAGAAAACGCA-ACTAAAAAAACATTATATGAAAT
377 C-C--AT--C--CT-AG-TACTA-CTC-TCG-CCCAA-GCACGCT----TAAC--T-GCGGAGTT
*** ** ** * *** * * *
27354 AAAATGGGA-GGGGTGCAACACGAGGACTTCCCAGGA-GGTCACCCATCCTAGTACTACTCTCGC
422 CTGATGGGATCCGGTGCATTA-G-TG-C-TGGTATGATCG-CACCCGT-C-A--ACT-CT-T-GC
* * ** ** *** * * * * * * * **
27417 CCAAGC-ACGC-T-TAACTGC-GAGTTCTGATGGGA--TCCG-GT-GCA-TT-AGTGCTGGTATG
475 GCAATCTATTCATATAAAGGCTG-CCCCTTATCGCACTTGCGCCTCGAATTTAAATGC--AAAT-
* * * ** * * * * *** ** *
27472 ATCGCACCCGTCAA-CTC-TTGCGCA--ATCTA-TTCATATAAAGGC-TACCCCTTATCGCACTT
536 -TCG-A-CC--AAATATCGTTCCAAATTATTTATTTCACA-AAACGCAAATAACGAAT-G-AGTT
* * * ** *
27531 GCGCCTCGAATTTAAAT
593 ACACCACG----TGGAG
** * * * * *
27548 ACAAATTCGACCAAAAAAAACATTCTATGAAATAAAATGGGAGGGGCGCAACACGAGGACTTCCC
1 A-AAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCC
27613 AGGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGAT
65 AGGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGAT
27678 CCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT
130 CCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT
27743 GCCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATT
195 GCCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATT
27808 TATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAAC-AAAAAAACAT
260 TATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACAT
27872 TATATGAAA-AAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACT
325 TATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACT
27936 ACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGA
390 ACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGA
28001 TCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTC
455 TCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTC
28066 GAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACG
520 GAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACG
28131 AATGAGTTACACCACGTGGAG
585 AATGAGTTACACCACGTGGAG
*
28152 AAAACGCAACTAAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
1 AAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
28217 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
66 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
28282 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
131 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
28347 CCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
196 CCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
28412 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATT
261 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATT
28477 ATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTA
326 ATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTA
28542 CTCTCGCCCAAGCACGCTTAACTGC-GAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGAT
391 CTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGAT
*
28606 CGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCACACTTGCGCCTCG
456 CGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTCG
28671 AATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGA
521 AATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGA
28736 ATGAGTTACACCACGTGGAG
586 ATGAGTTACACCACGTGGAG
*
28756 AAAACGCAACTAAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
1 AAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
28821 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
66 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
28886 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
131 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
*
28951 CCCCTTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
196 CCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
29016 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATT
261 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATT
29081 ATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTA
326 ATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTA
29146 CTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGAT
391 CTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGAT
* *
29211 CGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT-CCCATTATCACACTTGCGCCTCG
456 CGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTCG
29275 AATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGA
521 AATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGA
29340 ATGAGTTACACCACGTGGAG
586 ATGAGTTACACCACGTGGAG
*
29360 AAAACGCAACTAAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
1 AAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
29425 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
66 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
29490 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
131 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
*
29555 CCCCTTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
196 CCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
29620 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATT
261 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATT
29685 ATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTA
326 ATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTA
29750 CTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGAT
391 CTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGAT
29815 CGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTCG
456 CGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTCG
29880 AATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGA
521 AATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGA
29945 ATGAGTTACACCACGTGGAG
586 ATGAGTTACACCACGTGGAG
*
29965 AAAACGCAACTAAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
1 AAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
30030 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
66 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
30095 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT-
131 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
*
30159 CCCATTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
196 CCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
30224 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAAACAT
261 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT-AAAAAAACAT
30289 TATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACT
325 TATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACT
30354 ACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGA
390 ACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGA
30419 TCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTC
455 TCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTC
30484 GAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACG
520 GAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACG
30549 AATGAGTTACACCACGTGGAG
585 AATGAGTTACACCACGTGGAG
*
30570 AAAACGCAACTAAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
1 AAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
30635 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGC-GAGTTCTGATGGGATC
66 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
30699 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
131 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
*
30764 -CCCTTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
196 CCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
30828 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATT
261 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATT
30893 ATATGAAA-AAAATGGGAGGGGTGCAACACGAGGACTTCCCA-GAGGTCACCCATCCTAGTACTA
326 ATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTA
30956 CTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGAT
391 CTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGAT
31021 CGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-CCCTTATCGCACTTGCGCCTCG
456 CGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTCG
31085 AATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGA
521 AATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGA
31150 ATGAGTTACACCACGTGGAG
586 ATGAGTTACACCACGTGGAG
*
31170 AAAACGCAACT-AAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
1 AAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
31234 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
66 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
31299 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
131 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
*
31364 -CCCTTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
196 CCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
31428 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAAACAT
261 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT-AAAAAAACAT
31493 TATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACT
325 TATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACT
31558 ACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGA
390 ACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGA
31623 TCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTC
455 TCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTC
31688 GAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACG
520 GAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACG
31753 AATGAGTTACACCACGTGGAG
585 AATGAGTTACACCACGTGGAG
*
31774 AAAACGCAACT-AAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
1 AAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
31838 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
66 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
31903 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
131 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
**
31968 CCTATTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
196 CCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
32033 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAAACAT
261 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT-AAAAAAACAT
32098 TATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACT
325 TATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACT
32163 ACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGA
390 ACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGA
32228 TCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTC
455 TCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTC
32293 GAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACG
520 GAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACG
32358 AATGAGTTACACCACGTGGAG
585 AATGAGTTACACCACGTGGAG
* *
32379 AAAACGCAACTAAAAAAAACATTTTATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
1 AAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
32444 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
66 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
32509 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT-
131 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
*
32573 CCCATTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
196 CCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
32638 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATT
261 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATT
32703 ATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCA-GAGGTCACCCATCCTAGTACTA
326 ATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTA
32767 CTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGAT
391 CTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGAT
*
32832 CGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-CCCTTATTGCACTTGCGCCTCG
456 CGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTCG
32896 AATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGA
521 AATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGA
32961 ATGAGTTACACCACGTGGAG
586 ATGAGTTACACCACGTGGAG
*
32981 AAAACGCAACT-AAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
1 AAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
33045 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
66 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
33110 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
131 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
*
33175 -CCCTTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
196 CCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
33239 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACT--AAAAACATT
261 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATT
33302 ATATGAAA-AAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTA
326 ATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTA
33366 CTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGAT
391 CTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGAT
* *
33431 CGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT-CCCATTATCACACTTGCGCCTCG
456 CGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTCG
33495 AATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAA
521 AATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAA
33553 CTAAAAAAAA
Statistics
Matches: 20016, Mismatches: 1974, Indels: 2391
0.82 0.08 0.10
Matches are distributed among these distances:
578 24 0.00
579 360 0.02
580 181 0.01
585 1 0.00
586 1 0.00
587 1 0.00
588 2 0.00
589 50 0.00
590 4 0.00
591 16 0.00
592 14 0.00
593 4 0.00
594 224 0.01
595 220 0.01
596 231 0.01
597 887 0.04
598 664 0.03
599 1084 0.05
600 780 0.04
601 1565 0.08
602 1129 0.06
603 2487 0.12
604 3689 0.18
605 3314 0.17
606 502 0.03
607 146 0.01
608 107 0.01
609 70 0.00
610 62 0.00
611 77 0.00
612 44 0.00
613 41 0.00
614 49 0.00
615 62 0.00
616 18 0.00
617 18 0.00
618 26 0.00
619 30 0.00
620 26 0.00
621 19 0.00
622 11 0.00
623 14 0.00
624 5 0.00
625 24 0.00
626 15 0.00
627 6 0.00
628 7 0.00
629 9 0.00
630 7 0.00
631 15 0.00
632 27 0.00
633 17 0.00
634 12 0.00
635 10 0.00
636 44 0.00
637 18 0.00
638 22 0.00
639 22 0.00
640 43 0.00
641 34 0.00
642 24 0.00
643 24 0.00
644 14 0.00
645 20 0.00
646 20 0.00
647 9 0.00
648 14 0.00
649 9 0.00
650 8 0.00
651 14 0.00
652 10 0.00
653 13 0.00
654 19 0.00
655 31 0.00
656 19 0.00
657 17 0.00
658 30 0.00
659 33 0.00
660 29 0.00
661 44 0.00
662 34 0.00
663 30 0.00
664 52 0.00
665 58 0.00
666 23 0.00
667 24 0.00
668 38 0.00
669 46 0.00
670 20 0.00
671 33 0.00
672 61 0.00
673 58 0.00
674 44 0.00
675 18 0.00
676 34 0.00
677 52 0.00
678 47 0.00
679 40 0.00
680 21 0.00
681 22 0.00
682 13 0.00
683 13 0.00
684 20 0.00
685 11 0.00
686 6 0.00
687 13 0.00
688 16 0.00
689 4 0.00
690 10 0.00
691 4 0.00
692 12 0.00
693 17 0.00
694 30 0.00
695 23 0.00
696 12 0.00
697 7 0.00
698 5 0.00
699 4 0.00
700 5 0.00
701 9 0.00
702 10 0.00
703 10 0.00
704 8 0.00
705 4 0.00
706 2 0.00
707 1 0.00
ACGTcount: A:0.32, C:0.24, G:0.19, T:0.24
Consensus pattern (605 bp):
AAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
CCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATT
ATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTA
CTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGAT
CGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTCG
AATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGA
ATGAGTTACACCACGTGGAG
Found at i:14360 original size:300 final size:299
Alignment explanation
Indices: 13317--14487 Score: 2217
Period size: 299 Copynumber: 3.9 Consensus size: 299
13307 TTTATTTCAC
13317 AAAACGCAA-TAAAAAAAACATT-TATGAAAAAAATGGGAGGGGTGCAACACGAGGACTTCCCAG
1 AAAACGCAACT-AAAAAAACATTATATGAAAAAAATGGGAGGGGTGCAACACGAGGACTTCCCAG
13380 GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCC
65 GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCC
13445 GGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGC
130 GGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGC
*
13510 CCCTTATCACACTTGCGCCTCAAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTA
195 CCCTTAT--CACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTA
13575 TTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
258 TTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
13617 AAAACGCAACTAAAAAAACATTATATGAAAAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGG
1 AAAACGCAACTAAAAAAACATTATATGAAAAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGG
13682 AGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCG
66 AGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCG
13747 GTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCC
131 GTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCC
13812 CCTTATCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTT
196 CCTTATCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTT
13877 CACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
261 CACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
13916 AAAACGCAACTAAAAAAACATTATATGAAAAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGG
1 AAAACGCAACTAAAAAAACATTATATGAAAAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGG
13981 AGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCG
66 AGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCG
14046 GTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-C
131 GTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCC
14110 CCTTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTAT
196 CCTTAT--CACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTAT
14175 TTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
259 TTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
14216 AAAACGCAACTAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA-
1 AAAACGCAACTAAAAAAACATTATATGAAA-AAAATGGGAGGGGTGCAACACGAGGACTTCCCAG
* *
14280 GAGGTCACCCATTCTAGTACTACTCTCGCCCAAGCACGCTTAGCTGCGGAGTTCTGATGGGATCC
65 GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCC
14345 GGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-
130 GGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGC
14409 CCCTTATCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATT
195 CCCTTATCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATT
14474 TCACAAAAACGCAA
260 TCAC-AAAACGCAA
14488 CGTAAAAAAA
Statistics
Matches: 862, Mismatches: 3, Indels: 13
0.98 0.00 0.01
Matches are distributed among these distances:
298 69 0.08
299 299 0.35
300 282 0.33
301 212 0.25
ACGTcount: A:0.32, C:0.24, G:0.19, T:0.24
Consensus pattern (299 bp):
AAAACGCAACTAAAAAAACATTATATGAAAAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGG
AGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCG
GTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCC
CCTTATCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTT
CACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
Found at i:14485 original size:599 final size:599
Alignment explanation
Indices: 13317--14487 Score: 2242
Period size: 599 Copynumber: 2.0 Consensus size: 599
13307 TTTATTTCAC
13317 AAAACGCAATAAAAAAAACATTTATGAAAAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGA
1 AAAACGCAATAAAAAAAACATTTATGAAAAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGA
13382 GGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGG
66 GGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGG
13447 TGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCC
131 TGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCC
13512 CTTATCACACTTGCGCCTCAAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATT
196 CTTATCACACTTGCGCCTCAAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATT
13577 TCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATTATA
261 TCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATTATA
13642 TGAAAAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTACTCT
326 TGAAAAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTACTCT
13707 CGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCA
391 CGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCA
13772 CCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCACTTGCGCCTCGAATTTA
456 CCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCACTTGCGCCTCGAATTTA
13837 AATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGT
521 AATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGT
13902 TACACCACGTGGAG
586 TACACCACGTGGAG
13916 AAAACGCAACT-AAAAAAACATTATATGAAAAAAATGGGAGGGGTGCAACACGAGGACTTCCCAG
1 AAAACGCAA-TAAAAAAAACATT-TATGAAAAAAATGGGAGGGGTGCAACACGAGGACTTCCCAG
13980 GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCC
64 GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCC
14045 GGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-
129 GGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGC
* *
14109 CCCTTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTA
194 CCCTTATCACACTTGCGCCTCAAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTA
14174 TTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATTA
259 TTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATTA
*
14239 TATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA-GAGGTCACCCATTCTAGTACTAC
324 TATGAAA-AAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTAC
*
14303 TCTCGCCCAAGCACGCTTAGCTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATC
388 TCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATC
14368 GCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-CCCTTATCACTTGCGCCTCGAAT
453 GCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCACTTGCGCCTCGAAT
14432 TTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAAACGCAA
518 TTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCAC-AAAACGCAA
14488 CGTAAAAAAA
Statistics
Matches: 564, Mismatches: 4, Indels: 8
0.98 0.01 0.01
Matches are distributed among these distances:
598 69 0.12
599 291 0.52
600 204 0.36
ACGTcount: A:0.32, C:0.24, G:0.19, T:0.24
Consensus pattern (599 bp):
AAAACGCAATAAAAAAAACATTTATGAAAAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGA
GGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGG
TGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCC
CTTATCACACTTGCGCCTCAAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATT
TCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATTATA
TGAAAAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTACTCT
CGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCA
CCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCACTTGCGCCTCGAATTTA
AATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGT
TACACCACGTGGAG
Found at i:15825 original size:301 final size:301
Alignment explanation
Indices: 14740--16617 Score: 3411
Period size: 300 Copynumber: 6.3 Consensus size: 301
14730 TTTATTTCAC
14740 AAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
1 AAAACGCAACT-AAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
14805 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGC-GAGTTCTGATGGGATC
65 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
*
14869 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAATGGCTG
130 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
14934 CCCATTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
195 CCC-TTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
14999 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
259 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
15042 AAAACGCAACTAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAG
1 AAAACGCAACTAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAG
15107 GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCC
66 GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCC
15172 GGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGC
131 GGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGC
15237 CCTTATC-CACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTAT
196 CCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTAT
15301 TTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
261 TTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
* *
15342 AAAACGCAAC-AAAAAAACATTCTATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAG
1 AAAACGCAACTAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAG
15406 GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCC
66 GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCC
15471 GGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGC
131 GGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGC
15536 CCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTAT
196 CCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTAT
15601 TTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
261 TTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
15642 AAAACGCAACTAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAG
1 AAAACGCAACTAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAG
15707 GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCC
66 GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCC
15772 GGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGC
131 GGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGC
15837 CCATTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTA
196 CC-TTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTA
15902 TTTCACAAAACGCAAATAACGAATGAGTTACA-CACGTGGAG
260 TTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
* *
15943 AAAACGCAAC-AAAAAAACATTCTATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAG
1 AAAACGCAACTAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAG
16007 GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCC
66 GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCC
*
16072 GGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTTC
131 GGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGC
* * *
16137 CCCT-TCTCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAATTATCGTTCCAAATTATTTAT
196 CCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTAT
* *
16201 TTCAC-AAACAGTAAATAACGAATAAGTTACACCACGTGGAG
261 TTCACAAAAC-GCAAATAACGAATGAGTTACACCACGTGGAG
*
16242 AAAACGGAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
1 AAAACGCAACT-AAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
16307 -GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACT--GGAGTTCTGAT-GGATC
65 GGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
16368 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
130 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
** *
16433 CCCCTTATCGGACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAACTATTT
195 -CCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
16498 ATTTCACAAAACGC-AATAACGAAT-AGTTACA-CAC--GG-G
259 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
*
16535 AAAACGCAACT--AAAAACATTATATGAAAC-AAA-GGGAGGGGTGCAACACGAGGACTTCCAAG
1 AAAACGCAACTAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAG
16596 GAGGTCACCCATCCTAGTACTA
66 GAGGTCACCCATCCTAGTACTA
16618 TCGTTCCAAA
Statistics
Matches: 1539, Mismatches: 25, Indels: 37
0.96 0.02 0.02
Matches are distributed among these distances:
288 27 0.02
289 25 0.02
290 18 0.01
293 11 0.01
294 2 0.00
296 3 0.00
297 80 0.05
298 107 0.07
299 270 0.18
300 448 0.29
301 360 0.23
302 188 0.12
ACGTcount: A:0.33, C:0.24, G:0.19, T:0.24
Consensus pattern (301 bp):
AAAACGCAACTAAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAG
GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCC
GGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGC
CCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTAT
TTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
Found at i:16729 original size:146 final size:136
Alignment explanation
Indices: 16480--16763 Score: 451
Period size: 146 Copynumber: 2.0 Consensus size: 136
16470 TTCGACCAAA
16480 TATCGTTCCAAACTATTTATTTCACAAAACGCAATAACGAATAGTTACACACGGGAAAACGCAAC
1 TATCGTTCCAAACTATTTATTTCACAAAACGCAATAACGAATAGTTACACACGGGAAAACGCAAC
*
16545 TAAAAACATTATATGAAACAAAGGGAGGGGTGCAACACGAGGACTTCCAAGGAGGTCACCCATCC
66 TAAAAACATTATATGAAAAAAAGGGAGGGGTGCAACACGAGGACTTCCAAGGAGGTCACCCATCC
16610 TAGTAC
131 TAGTAC
*
16616 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAACTATTTATTTCACAAAACGC-AATAACGAAT-AGTTACA-CAC--GG-GAAAA
*
16681 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
60 CGCAACT--AAAAACATTATATGAAA-AAAA-GGGAGGGGTGCAACACGAGGACTTCCAAGGAGG
16746 TCACCCATCCTAGTAC
121 TCACCCATCCTAGTAC
16762 TA
1 TA
16764 CTCTCGCCCA
Statistics
Matches: 135, Mismatches: 3, Indels: 10
0.91 0.02 0.07
Matches are distributed among these distances:
136 31 0.23
137 10 0.07
138 7 0.05
139 3 0.02
141 2 0.01
142 12 0.09
144 17 0.13
145 3 0.02
146 50 0.37
ACGTcount: A:0.40, C:0.21, G:0.18, T:0.21
Consensus pattern (136 bp):
TATCGTTCCAAACTATTTATTTCACAAAACGCAATAACGAATAGTTACACACGGGAAAACGCAAC
TAAAAACATTATATGAAAAAAAGGGAGGGGTGCAACACGAGGACTTCCAAGGAGGTCACCCATCC
TAGTAC
Found at i:17968 original size:301 final size:302
Alignment explanation
Indices: 16616--33552 Score: 17996
Period size: 302 Copynumber: 56.1 Consensus size: 302
16606 ATCCTAGTAC
16616 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
16681 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
66 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
16746 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
131 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
16811 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-CCCT
196 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
16875 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
261 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
16917 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
**
16982 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTAAAACACGAGGACTTCCCAGGAGG
66 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
17047 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGC-GAGTTCTGATGGGATCCGGTG
131 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
17111 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-CCCT
196 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
17175 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
261 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
17217 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACC-CGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
17281 CGCAACTAAAAAAACATTATATGAAATAAAAT-GGAGGGGTGCAA-ACGAGGACTTCCCAGGAGG
66 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
17344 TCACCCATCCTAGTACTACTCTCGCCCAAGCA--CTTAACTGCGGAGTTCTGATGGGATCC-GTG
131 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
17406 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATT-ATAT-AAGGCTGCCCCT
196 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
17469 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACC-AA
261 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
17510 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
17575 CGCAACTAAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAG
66 CGCAACT-AAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAG
17640 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGT
130 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGT
17705 GCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCC
195 GCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCC
*
17770 ATATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
260 TTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
17813 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTT-CACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
* **
17877 CGCAACTAAAAAAACATTATATGAAATAAAAGGGGAGGGGTAAAACACGAGGACTTCCCAGGAGG
66 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
17942 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
131 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
18007 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
196 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
18072 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
261 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
18114 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
* ** *
18179 CGCAACTAAAAAAACATTATATGAAATAAAAGGGGAGGGGTAAAACGCGAGGACTTCCCAGGAGG
66 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
18244 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
131 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
18309 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
196 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
18374 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
261 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
18416 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
*
18481 CGCAACTAAAAAAAACATTATATGAAATAAAAAGGGAGGGGTGCAACACGAGGACTTCCCAGGAG
66 CGCAACT-AAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAG
18546 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGAAT-GGATCCGG
130 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTG-ATGGGATCCGG
18610 TGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCC
194 TGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCC
18675 CTTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
259 CTTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
18719 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG-AAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
18783 CGCAACTAAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAG
66 CGCAACT-AAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAG
18848 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGT
130 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGT
18913 GCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCC
195 GCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCC
18978 TTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
260 TTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
19021 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTT-CAACCACGTGGAGAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTAC-ACCACGTGGAGAAA
*
19085 ACGCAACTAAAAAAACATTATATGAAA-AAAA-GGGA-GGG-GCAA-ACG-GGACATCCCAGGAG
65 ACGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAG
19144 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGT
130 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGT
19209 GCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-CCC
195 GCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCC
19273 TTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
260 TTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
19316 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
19381 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
66 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
19446 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
131 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
19511 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
196 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
*
19576 TATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
261 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
19618 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
19683 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
66 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
19748 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
131 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
19813 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-CCCT
196 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
19877 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
261 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
19919 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
19984 CGCAACTAAAAAAACATTATATGAAATAAAAT-GGAGGGGTGCAACACGAGGACTTCCCAGGAGG
66 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
20048 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
131 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
*
20113 CATTAGTGCTGGTATGATCGCACCCGTCTACTCTTGCGCAATCTATTCATATAAAGGCT-CCCCT
196 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
20177 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
261 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
*
20219 TATCGTTCCAAATTATTTATTTCAAAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
20284 CGCAACT-AAAAAA-ATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
66 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
20347 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
131 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
20412 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-CCCT
196 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
20476 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
261 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
20518 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
20583 CGCAACT-AAAAAACATTATATGAAATAAAA-GGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
66 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
20646 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
131 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
20711 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
196 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
20776 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
261 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
* *
20818 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAATGAATGAGTTACACCACGTGCAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
20883 CGCAACTAAAACAAACATTATATGAAATAAAAT-------G-G------GA-G--------GGAG
66 CGCAACTAAAA-AAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAG
* * * *
20925 GTCACCCATCCTAGTACTACTTTCGCCGAAGCACGTTTAACTGCGGAGTTTTGATGGGATCCGGT
130 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGT
20990 GCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-CCC
195 GCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCC
21054 TTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
260 TTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
21097 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
21162 CGCAACTAAAAAAACATTATATGAAATAAAA-GGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
66 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
21226 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
131 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
21291 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-CCCT
196 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
21355 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
261 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
21397 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
21462 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
66 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
21527 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
131 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
21592 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
196 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
21657 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
261 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
21699 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
21764 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
66 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
21829 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
131 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
21894 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
196 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
21959 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
261 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
22001 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
22066 CGCAACTAAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAG
66 CGCAACT-AAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAG
22131 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGT
130 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGT
22196 GCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-CCC
195 GCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCC
22260 TTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
260 TTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
22303 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
22368 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
66 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
22433 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
131 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
22498 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
196 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
22563 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
261 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
22605 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
22670 CGCAAACTAAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGA
66 CGC-AACT-AAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGA
22735 GGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGC-GAGTTCTGATGGGATCCGG
129 GGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGG
22799 TGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCC
194 TGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCC
22864 CTTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
259 CTTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
22908 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
22973 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
66 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
23038 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
131 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
23103 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-CCCT
196 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
23167 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
261 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
23209 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
23274 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
66 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
23339 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
131 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
23404 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
196 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
23469 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
261 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
23511 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
*
23576 CGCAACTAAAAAAAACATTATATGAAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGA
66 CGCAACT-AAAAAAACATTATATG-AAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGA
23641 GGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGG
129 GGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGG
23706 TGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCC
194 TGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCC
23771 CTTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
259 CTTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
*
23815 TATCGTTCCAAATTATTTATTTCAAAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
23880 CGCAACTAAAAAAAAACATT-TAATGAAATAAAA-GGGAGGGGTGCAACACGAGGACTTCCCAGG
66 CGCAACT--AAAAAAACATTAT-ATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGG
23943 AGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGC-GAGTTCTGATGGGATCCG
128 AGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCG
24007 GTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-C
193 GTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCC
24071 CCTTAT--CACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
258 CCTTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
24114 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
24179 CGCAACTAAAAAAA-ATTATATGAAA-AAAATGGGAGGGGTGCAACAC-AGGACTTCCCA-GAGG
66 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
24240 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGC-G-GTTCTGATGGGATCCGGTG
131 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
* *
24303 CATTAGTGTTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTTATATAAAGGCTGCCCCT
196 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
*
24368 TATCGCACTTGCGCCTCGAAATTTTAAATACAAATTCGACCCAAAAA
261 TATCGCACTTGCGCCTCG-AA-TTTAAATGCAAATTCGA-CC--AAA
* * * ** * ** ** * * * * ** * *
24415 AAACATTTATGAAATAAAATGGGAGGGGT-GCAACACG-AGGACT-TCCCAGGAGTCAC-CCATC
1 TATC-GTT-CCAAAT--TAT-TTA--TTTCACAAAACGCA--AATAACGAATGAGTTACACCA-C
* * ** ** * ** * ** ** ** *** ** **
24476 CTAGTACTACTCTCGCCCAAGCACGC-TTA-ACTGCGGAGTTCTGATGGGATCCGGTGCATTA-G
56 GT-GGAGAAAACGCAACTAAAAAAACATTATA-T---GAAATAAAATGGGA-GGGGTGCAACACG
* *** * * * * * **
24538 -TG-C-TGGTATGATCG-CACCCGT-C-A--ACT-CT-T-GCGCAATCTATTCATATAAGGCTGC
115 AGGACTTCCCAGGA-GGTCACCCATCCTAGTACTACTCTCGCCCAAGC-ACGC-T-TAA--CTGC
*** ** * * * ** * *
24592 -CCTTATCACACTTGCG--CC--TCGAATTTAAATGC--AAAT--TCG-A-CC--AAATATCGTT
174 GGAGT-TCTGA--TGGGATCCGGT-GCA-TT-AGTGCTGGTATGATCGCACCCGTCAA-CTC-TT
* * ** *** * * * * * * * ** *
24644 -C-CAAAT-TATTTATTTCACAAAAC-G-CAAATAACGAATGAGTTACACCACGTGGA-GAAAAC
231 GCGC-AATCTATTCATAT-A-AAGGCTGCCCCTTATCG---CACTTGCGCCTC--GAATTTAAAT
* * **
24703 GC-AACT-AAAAAAA
288 GCAAATTCGACCAAA
* ** * * ** ** * * * * ** * *
24716 CATTATAT-GAAATAAAATGGGAGGGGT-GCAACACG-AGGACT-TCCCAGGAGGT-CACCCATC
1 TATCGT-TCCAAAT--TAT-TTA--TTTCACAAAACGCA--AATAACGAATGAGTTACA-CCA-C
* * ** ** * ** * ** ** ** *** ** **
24776 CTAGTACTACTCTCGCCCAAGCACGC-TTA-ACTGCGAGTTCTGATGGGATCCGGTGCATTA-G-
56 GT-GGAGAAAACGCAACTAAAAAAACATTATA-T--GAAATAAAATGGGA-GGGGTGCAACACGA
* *** * * * * * ** * **
24837 TG-C-TGGTATGATCG-CACCCGT-C-A--ACT-CT-T-GCGCAATCTATTCATATAA-AG-GCT
116 GGACTTCCCAGGA-GGTCACCCATCCTAGTACTACTCTCGCCCAAGC-ACGC-T-TAACTGCGGA
** * *** * * * * ** * *
24890 GCCCTTATCACACTTGCGCCTCGAATTTAAATGC--AAAT--TCG-A-CC--AAATATCGTT-C-
177 GTTCTGATGGGA--TCCG-GT-GCA-TT-AGTGCTGGTATGATCGCACCCGTCAA-CTC-TTGCG
* * ** *** * * * * * * * ** *
24945 CAAAT-TATTTATTTCACAAAAC-G-CAAATAACGAATGAGTTACACCACGTGGA-GAAAACGC-
234 C-AATCTATTCATAT-A-AAGGCTGCCCCTTATCG---CACTTGCGCCTC--GAATTTAAATGCA
* ** **
25005 AACTAAAAAAAA
291 AATTCGACCAAA
* ** * * ** ** * * * * ** * *
25017 CATTATAT-GAAATAAAATGGGAGGGGT-GCAACACG-AGGACT-TCCCAGGAGGT-CACCCATC
1 TATCGT-TCCAAAT--TAT-TTA--TTTCACAAAACGCA--AATAACGAATGAGTTACA-CCA-C
* * ** ** * ** * ** ** ** *** ** **
25077 CTAGTACTACTCTCGCCCAAGCACGC-TTA-ACTGCGGAGTTCTGATGGGATCCGGTGCATTA-G
56 GT-GGAGAAAACGCAACTAAAAAAACATTATA-T---GAAATAAAATGGGA-GGGGTGCAACACG
* *** * * * * * ** ** *
25139 -TG-C-TGGTATGATCG-CACCCGT-C-A--ACT-CT-T-GCGCAATCTATTCATATAAAGGCTG
115 AGGACTTCCCAGGA-GGTCACCCATCCTAGTACTACTCTCGCCCAAGC-ACGC-T-TAACTGCGG
*** * * * * * * * ** * *
25193 -CCCCTTATCGCACTTGCGCCTCGAATTTAAATGC--AAAT--TCG-A-CC--AAATATCGTT-C
176 AGTTCTGATGGGA--TCCG-GT-GCA-TT-AGTGCTGGTATGATCGCACCCGTCAA-CTC-TTGC
* * * * **** * * * * * * *
25248 -CAAAT-TATTTATTTCACAA-ACAG-TAAATAACGAATGAGTTACACCAC-AGA---AAACGC-
233 GC-AATCTATTCATAT-A-AAGGCTGCCCCTTATCG---CACTTGCGCCTCGA-ATTTAAATGCA
* * **
25304 AACT-AAAAAAA
291 AATTCGACCAAA
* * ** ** ** * * * * ** * * *
25315 TTAT--AT-GAAAAAATGGGAGGGGT-GCAACACG-AGGACT-TCCCAGGAGGT-CACCCATCCT
1 -TATCGTTCCAAATTAT-TTA--TTTCACAAAACGCA--AATAACGAATGAGTTACA-CCA-CGT
* ** ** * ** * ** ** ** *** ** ** *
25373 AGTACTACTCTCGCCCAAGCACGC-TTA-ACTGCGGAGTTCTGATGGGATCCGGTGCATTA-G-T
58 -GGAGAAAACGCAACTAAAAAAACATTATA-T---GAAATAAAATGGGA-GGGGTGCAACACGAG
*** * * * * * ** * **
25434 G-C-TGGTATGATCG-CACCCGT-C-A--ACT-CT-T-GCGCAATCTATTCATATAA-AG-GCTG
117 GACTTCCCAGGA-GGTCACCCATCCTAGTACTACTCTCGCCCAAGC-ACGC-T-TAACTGCGGAG
** * *** * * * * ** * *
25487 CCCTTATCACACTTGCGCCTCGAATTTAAATGC--AAAT--TCG-A-CC--AAATATCGTT-C-C
178 TTCTGATGGGA--TCCG-GT-GCA-TT-AGTGCTGGTATGATCGCACCCGTCAA-CTC-TTGCGC
* * ** *** * * * * * * * ** *
25542 AAAT-TATTTATTTCACAAAAC-G-CAAATAACGAATGAGTTACACCACGTGGA-GAAAACGC-A
235 -AATCTATTCATAT-A-AAGGCTGCCCCTTATCG---CACTTGCGCCTC--GAATTTAAATGCAA
* ** **
25602 ACTAAAAAAACA
292 ATTCGACCAA-A
* *** ** ** * * * * ** * *
25614 TTATATGAAACAAA--ATGGGAGGGGT-GCAACACG-AGGACT-TCCCA-GAGGT-CACCCATCC
1 -TAT-CGTTCCAAATTAT-TTA--TTTCACAAAACGCA--AATAACGAATGAGTTACA-CCA-CG
* ** ** * ** * ** ** ** *** ** **
25672 TAGTACTACTCTCGCCCAAGCACGC-TTA-ACTGCGGAGTTCTGATGGGATCCGGTGCATTA-G-
57 T-GGAGAAAACGCAACTAAAAAAACATTATA-T---GAAATAAAATGGGA-GGGGTGCAACACGA
* *** * * * * * ** ** *
25733 TG-C-TGGTATGATCG-CACCCGT-C-A--ACT-CT-T-GCGCAATCTATTCATATAAAGGCTGC
116 GGACTTCCCAGGA-GGTCACCCATCCTAGTACTACTCTCGCCCAAGC-ACGC-T-TAACTGC-GG
* * * * * * * * ** * *
25788 CG--CTTATCGCACTTGCGCCTCGAATTTAAATGC--AAAT--TCG-A-CC--AAATATCGTT-C
176 AGTTCTGATGGGA--TCCG-GT-GCA-TT-AGTGCTGGTATGATCGCACCCGTCAA-CTC-TTGC
* * ** *** * * * * * * * ** *
25842 -CAAAT-TATTTATTTCACAAAAC-G-CAAATAACGAATGAGTTACACCACGTGGA-GAAAACGC
233 GC-AATCTATTCATAT-A-AAGGCTGCCCCTTATCG---CACTTGCGCCTC--GAATTTAAATGC
* **
25902 -AA--CAAAAAAA
290 AAATTCGACCAAA
* ** * * ** ** * * * * ** * *
25912 CATTATAT-GAAATAAAATGGGAGGGGT-GCAACACG-AGGACT-TCCCAGGAGGT-CACCCATC
1 TATCGT-TCCAAAT--TAT-TTA--TTTCACAAAACGCA--AATAACGAATGAGTTACA-CCA-C
* * ** ** * ** * ** ** ** *** ** **
25972 CTAGTACTACTCTCGCCCAAGCACGC-TTA-ACTGCGGAGTTCTGATGGGATCCGGTGCATTA-G
56 GT-GGAGAAAACGCAACTAAAAAAACATTATA-T---GAAATAAAATGGGA-GGGGTGCAACACG
* *** * * * * * ** *
26034 -TG-C-TGGTATGATCG-CACCCGT-C-A--ACT-CT-T-GCGCAATCTATTCATAAAGGCTGC-
115 AGGACTTCCCAGGA-GGTCACCCATCCTAGTACTACTCTCGCCCAAGC-ACGC-TTAA--CTGCG
*** * * * * ** * *
26087 CCTTATCTCACTTGCG--CC--TCGAATTTAAATGC--AAAT--TCG-A-CC--AAATATCGTT-
175 GAGT-TCTGA--TGGGATCCGGT-GCA-TT-AGTGCTGGTATGATCGCACCCGTCAA-CTC-TTG
* * ** ***** ** * * * * * ** *
26139 C-CAAAT-TATTTATTTCACAAAACAAATAACGAAT-G-AGTTACACCACGTGGA-GAAAACGCA
232 CGC-AATCTATTCATAT-A-AAGGC-TGCCCCTTATCGCACTTGCGCCTC--GAATTTAAATGCA
* *** **
26199 ACTAAAAAAAACA
291 AATTCGACCAA-A
* *** ** ** * * * * ** * * *
26212 TTATATGAAACAAA--ATGGGAGGGGT-GCAACACG-AGGACT-TCCCAGGAGGT-CACCCATCC
1 -TAT-CGTTCCAAATTAT-TTA--TTTCACAAAACGCA--AATAACGAATGAGTTACA-CCA-CG
* ** ** * ** * ** ** *** *** ** ** *
26271 TAGTACTACTCTCGCCCAAGCACGC-TTA-ACTGCGGTTCTGATGGGATCCGGTGCATTA-G-TG
57 T-GGAGAAAACGCAACTAAAAAAACATTATA-TG-AAATAAAATGGGA-GGGGTGCAACACGAGG
*** * * * * * ** ** * **
26332 -C-TGGTATGATCG-CACCCGT-C-A--ACT-CT-T-GCGCAATCTATTCATATAAAGGCTG-CC
118 ACTTCCCAGGA-GGTCACCCATCCTAGTACTACTCTCGCCCAAGC-ACGC-T-TAACTGCGGAGT
* * * * * * * * ** * *
26386 CCTTATCGCACTTGCGCCTCGAATTTAAATGC--AAAT--TCG-A-CC--AAATATCGTT-C-CA
179 TCTGATGGGA--TCCG-GT-GCA-TT-AGTGCTGGTATGATCGCACCCGTCAA-CTC-TTGCGC-
* * ** *** * * * * * * * ** *
26441 AAT-TATTTATTTCACAAAAC-G-CAAATAACGAATGAGTTACACCACGTGGA-GAAAACGC-AA
235 AATCTATTCATAT-A-AAGGCTGCCCCTTATCG---CACTTGCGCCTC--GAATTTAAATGCAAA
* **
26501 --CAAAAAAAA
293 TTC-GACCAAA
* ** * * ** ** * * * * ** * *
26510 CATTATAT-GAAATAAAATGGGAGGGGT-GCAACACG-AGGACT-TCCCAGGAGGT-CACCCATC
1 TATCGT-TCCAAAT--TAT-TTA--TTTCACAAAACGCA--AATAACGAATGAGTTACA-CCA-C
* * ** ** * ** * ** ** ** *** ** **
26570 CTAGTACTACTCTCGCCCAAGCACGC-TTA-ACTGCGGAGTTCTGATGGGATCCGGTGCATTA-G
56 GT-GGAGAAAACGCAACTAAAAAAACATTATA-T---GAAATAAAATGGGA-GGGGTGCAACACG
* *** * * * * * ** ** *
26632 -TG-C-TGGTATGATCG-CACCCGT-C-A--ACT-CT-T-GCGCAATCTATTCATATAAAGGCTG
115 AGGACTTCCCAGGA-GGTCACCCATCCTAGTACTACTCTCGCCCAAGC-ACGC-T-TAACTGCGG
*** * * * * * * * ** * *
26686 -CCCCTTATCGCACTTGCGCCTCGAATTTAAATGC--AAAT--TCG-A-CC--AAATATCGTT-C
176 AGTTCTGATGGGA--TCCG-GT-GCA-TT-AGTGCTGGTATGATCGCACCCGTCAA-CTC-TTGC
* * ** *** * * * * * * * ** *
26741 -CAAAT-TATTTATTTCACAAAAC-G-CAAATAACGAATGAGTTACACCACGTGGA-GAAAACGC
233 GC-AATCTATTCATAT-A-AAGGCTGCCCCTTATCG---CACTTGCGCCTC--GAATTTAAATGC
* ** **
26801 -AACTAAAAAAACA
290 AAATTCGACCAA-A
* *** ** ** * * * * ** * * *
26814 TTATATGAAACAAA--ATGGGAGGGGT-GCAACACG-AGGACT-TCCCAGGAGGT-CACCCATCC
1 -TAT-CGTTCCAAATTAT-TTA--TTTCACAAAACGCA--AATAACGAATGAGTTACA-CCA-CG
* ** ** * ** * ** ** ** *** ** **
26873 TAGTACTACTCTCGCCCAAGCACGC-TTA-ACTGCGGAGTTCTGATGGGATCCGGTGCATTA-G-
57 T-GGAGAAAACGCAACTAAAAAAACATTATA-T---GAAATAAAATGGGA-GGGGTGCAACACGA
* *** * * * * * ** ** *
26934 TG-C-TGGTATGATCG-CACCCGT-C-A--ACT-CT-T-GCGCAATCTATTCATATAAAGGCTG-
116 GGACTTCCCAGGA-GGTCACCCATCCTAGTACTACTCTCGCCCAAGC-ACGC-T-TAACTGCGGA
*** * * * * * * * * * **** **
26988 CCCCTTATCGCACTTGCGCCTCGAATTTAAATAC--ATAT--TCG-ACCAAAAAAAACATT---C
177 GTTCTGATGGGA--TCCG-GT-GCA-TT-AGTGCTGGTATGATCGCACCCGTCAACTC-TTGCGC
* ** * * * ** * ** * ** ** * * *
27045 TATGAAATAAAATGGGAGGGTGCAAC--A-CGAGGACTT-C-CCAGGAGGTCACCCATCCTAGTA
235 AATCTATTCATAT-AAAGGCTGCCCCTTATC--GCACTTGCGCCTCGAATTTA--AATGC-A--A
* *
27105 CTACTCTCGCCCAAG
292 --A-T-TCGACCAAA
* * * * ** **** * * * **
27120 CA-CGCTT--AACTGCGGAGTTCTGAATGGATC-CGGTGC-ATTAGTGCTGGTATGA-TCGCACC
1 TATCG-TTCCAAAT---TA-TT-T-ATTTCA-CAAAACGCAAATA--AC--GAATGAGTTACACC
** ***** * *** ******* ** *** ** **
27179 -CGTTAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCACACTTGCGCCTCGAATTT
54 ACGTGGA-GAAAACGCAA-CTA---A-AAAAACATTATATGAAAT-A-AAATG-G-GAGGGGTGC
* * * * ** * * * * * * *
27243 AA-ATGCA--AATTCGACCA--A-AT-ATCGTTCCAAATTATTTA-T-T-TCACAA-AACGCAAA
109 AACACG-AGGACTTC--CCAGGAGGTCACCCATCC-TAGTA-CTACTCTCGCCCAAGCACGC--T
** ** * ** * * * **
27297 TAAC-GAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACATTA-T-ATGAAATAAAAT
167 TAACTG-CGGAGTT-C-TGA--TGG-G--ATC-C-GGT------GCATTAGTGCTG--GTATGAT
* * *** * * * ** ** *
27359 GGGAGGGGTGCAACAC--GAG-GA-C--TTCCCA-GGAGG-T-CACCCATCCTAGTAC-TACTCT
214 CGCACCCGT-CAACTCTTGCGCAATCTATTCATATAAAGGCTGC-CCC-T--TA-T-CGCACT-T
** * * * ****
27414 -CGCC-CAAGCACGCTTAACTGCGAGTTCTGATGGGA
271 GCGCCTC--G-A-ATTTAAATGCAAATTC-GACCAAA
* * * * ** * * *
27449 T-CCGGTGC--ATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTC-ATATAA
1 TATCGTTCCAAATTA-T--T--TAT--T-TCA-----CAA----AACGCAA-ATA-ACGA-AT-G
* * * * *** * *
27510 AGGCTACCCCTTATCGCACTTGCG-CCTCG-AATTTAAATACAAATTCGACCAAAAAAAACATTC
45 A-GTTACACC--A-CG---TGGAGAAAACGCAA-CT-AA----------------AAAAACATTA
*
27573 TATGAAATAAAATGGGAGGGGCGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTAC
85 TATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTAC
27638 TCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATC
150 TCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATC
*
27703 GCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCACACTTGCGCCTCGA
215 GCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCACTTGCGCCTCGA
27768 ATTTAAATGCAAATTCGACCAAA
280 ATTTAAATGCAAATTCGACCAAA
27791 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
27856 CGCAAC-AAAAAAACATTATATGAAA-AAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
66 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
27919 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
131 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
27984 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
196 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
28049 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
261 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
28091 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
28156 CGCAACTAAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAG
66 CGCAACT-AAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAG
28221 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGT
130 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGT
28286 GCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCC
195 GCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCC
*
28351 TTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
260 TTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
28394 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
28459 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
66 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
28524 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGC-GAGTTCTGATGGGATCCGGTG
131 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
28588 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
196 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
*
28653 TATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
261 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
28695 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
28760 CGCAACTAAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAG
66 CGCAACT-AAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAG
28825 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGT
130 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGT
28890 GCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCC
195 GCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCC
28955 TTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
260 TTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
28998 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
29063 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
66 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
29128 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
131 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
*
29193 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT-CCCAT
196 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
*
29257 TATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
261 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
29299 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
29364 CGCAACTAAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAG
66 CGCAACT-AAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAG
29429 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGT
130 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGT
29494 GCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCC
195 GCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCC
29559 TTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
260 TTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
29602 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
29667 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
66 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
29732 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
131 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
29797 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
196 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
29862 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
261 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
29904 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
29969 CGCAACTAAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAG
66 CGCAACT-AAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAG
30034 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGT
130 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGT
*
30099 GCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT-CCCA
195 GCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCC
*
30163 TTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
260 TTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
30206 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
30271 CGCAACTAAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAG
66 CGCAACT-AAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAG
30336 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGT
130 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGT
30401 GCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCC
195 GCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCC
30466 TTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
260 TTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
30509 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
30574 CGCAACTAAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAG
66 CGCAACT-AAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAG
30639 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGC-GAGTTCTGATGGGATCCGGT
130 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGT
30703 GCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-CCC
195 GCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCC
30767 TTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
260 TTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
30810 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
30875 CGCAACTAAAAAAACATTATATGAAA-AAAATGGGAGGGGTGCAACACGAGGACTTCCCA-GAGG
66 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
30938 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
131 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
31003 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-CCCT
196 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
31067 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
261 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
31109 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
31174 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
66 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
31239 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
131 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
31304 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-CCCT
196 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
31368 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
261 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
31410 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
31475 CGCAACTAAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAG
66 CGCAACT-AAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAG
31540 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGT
130 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGT
31605 GCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCC
195 GCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCC
31670 TTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
260 TTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
31713 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
31778 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
66 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
31843 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
131 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
**
31908 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCTAT
196 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
*
31973 TATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
261 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
32015 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
32080 CGCAACTAAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAG
66 CGCAACT-AAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAG
32145 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGT
130 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGT
32210 GCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCC
195 GCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCC
32275 TTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
260 TTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
32318 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
*
32383 CGCAACTAAAAAAAACATTTTATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAG
66 CGCAACT-AAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAG
32448 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGT
130 GTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGT
*
32513 GCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT-CCCA
195 GCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCC
*
32577 TTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
260 TTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
32620 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
32685 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCA-GAGG
66 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
32749 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
131 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
32814 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-CCCT
196 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
*
32878 TATTGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
261 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
32920 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
32985 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
66 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
33050 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
131 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
33115 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG-CCCT
196 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
33179 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
261 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
33221 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
33286 CGCAACT--AAAAACATTATATGAAA-AAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
66 CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
33348 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
131 TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
*
33413 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT-CCCAT
196 CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
*
33477 TATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
261 TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
33519 TATCGTTCCAAATTATTTATTTCACAAAACGCAA
1 TATCGTTCCAAATTATTTATTTCACAAAACGCAA
33553 CTAAAAAAAA
Statistics
Matches: 15695, Mismatches: 527, Indels: 831
0.92 0.03 0.05
Matches are distributed among these distances:
278 20 0.00
279 120 0.01
280 126 0.01
284 1 0.00
285 1 0.00
288 1 0.00
289 2 0.00
291 2 0.00
292 2 0.00
293 237 0.02
294 280 0.02
295 241 0.02
296 324 0.02
297 139 0.01
298 489 0.03
299 1109 0.07
300 1913 0.12
301 2889 0.18
302 4323 0.28
303 2543 0.16
304 424 0.03
305 39 0.00
306 25 0.00
307 36 0.00
308 26 0.00
309 12 0.00
310 10 0.00
311 24 0.00
312 12 0.00
313 14 0.00
314 9 0.00
315 1 0.00
316 2 0.00
317 4 0.00
318 11 0.00
319 4 0.00
320 10 0.00
321 3 0.00
322 1 0.00
323 2 0.00
324 6 0.00
325 7 0.00
326 5 0.00
327 8 0.00
328 16 0.00
329 7 0.00
330 8 0.00
332 10 0.00
333 4 0.00
334 8 0.00
335 4 0.00
336 1 0.00
337 5 0.00
338 3 0.00
339 4 0.00
340 6 0.00
341 5 0.00
342 10 0.00
343 29 0.00
344 5 0.00
345 16 0.00
346 12 0.00
347 3 0.00
348 6 0.00
349 5 0.00
350 5 0.00
351 3 0.00
353 1 0.00
354 10 0.00
355 3 0.00
356 11 0.00
357 7 0.00
358 22 0.00
359 5 0.00
360 4 0.00
ACGTcount: A:0.32, C:0.24, G:0.19, T:0.24
Consensus pattern (302 bp):
TATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAA
CGCAACTAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGG
TCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTG
CATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCT
TATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAA
Found at i:27200 original size:227 final size:228
Alignment explanation
Indices: 26805--27261 Score: 837
Period size: 227 Copynumber: 2.0 Consensus size: 228
26795 AAACGCAACT
26805 AAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCA
1 AAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCA
26870 TCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGT
66 TCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGT
*
26935 GCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCGCA
131 GCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCACA
*
27000 CTTGCGCCTCGAATTTAAATACATATTCGACCA
196 CTTGCGCCTCGAATTTAAATACAAATTCGACCA
* *
27033 AAAAAAACATTCTATGAAATAAAATGGGA-GGGTGCAACACGAGGACTTCCCAGGAGGTCACCCA
1 AAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCA
27097 TCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGAAT-GGATCCGGTGCATTAG
66 TCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTG-ATGGGATCCGGTGCATTAG
*
27161 TGCTGGTATGATCGCACCCGTTAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCAC
130 TGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCAC
*
27226 ACTTGCGCCTCGAATTTAAATGCAAATTCGACCA
195 ACTTGCGCCTCGAATTTAAATACAAATTCGACCA
27260 AA
1 AA
27262 TATCGTTCCA
Statistics
Matches: 222, Mismatches: 6, Indels: 3
0.96 0.03 0.01
Matches are distributed among these distances:
227 193 0.87
228 29 0.13
ACGTcount: A:0.29, C:0.26, G:0.21, T:0.24
Consensus pattern (228 bp):
AAAAAAACATTATATGAAACAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCA
TCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGT
GCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCACA
CTTGCGCCTCGAATTTAAATACAAATTCGACCA
Found at i:27764 original size:228 final size:227
Alignment explanation
Indices: 27334--27790 Score: 860
Period size: 228 Copynumber: 2.0 Consensus size: 227
27324 AAACGCAACT
*
27334 AAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCA
1 AAAAAAACATTATATGAAATAAAATGGGAGGGGCGCAACACGAGGACTTCCCAGGAGGTCACCCA
27399 TCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGAGTTCTGATGGGATCCGGTGCATTAGTG
66 TCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGAGTTCTGATGGGATCCGGTGCATTAGTG
*
27464 CTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTACCCCTTATCGCAC
131 CTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTACCCCTTATCACAC
27529 TTGCGCCTCGAATTTAAATACAAATTCGACCA
196 TTGCGCCTCGAATTTAAATACAAATTCGACCA
*
27561 AAAAAAACATTCTATGAAATAAAATGGGAGGGGCGCAACACGAGGACTTCCCAGGAGGTCACCCA
1 AAAAAAACATTATATGAAATAAAATGGGAGGGGCGCAACACGAGGACTTCCCAGGAGGTCACCCA
27626 TCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGT
66 TCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGC-GAGTTCTGATGGGATCCGGTGCATTAGT
*
27691 GCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCACA
130 GCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTACCCCTTATCACA
*
27756 CTTGCGCCTCGAATTTAAATGCAAATTCGACCA
195 CTTGCGCCTCGAATTTAAATACAAATTCGACCA
27789 AA
1 AA
27791 TATCGTTCCA
Statistics
Matches: 224, Mismatches: 5, Indels: 1
0.97 0.02 0.00
Matches are distributed among these distances:
227 99 0.44
228 125 0.56
ACGTcount: A:0.29, C:0.26, G:0.21, T:0.24
Consensus pattern (227 bp):
AAAAAAACATTATATGAAATAAAATGGGAGGGGCGCAACACGAGGACTTCCCAGGAGGTCACCCA
TCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGAGTTCTGATGGGATCCGGTGCATTAGTG
CTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTACCCCTTATCACAC
TTGCGCCTCGAATTTAAATACAAATTCGACCA
Found at i:34355 original size:302 final size:302
Alignment explanation
Indices: 33544--34934 Score: 2437
Period size: 302 Copynumber: 4.6 Consensus size: 302
33534 TTTATTTCAC
*
33544 AAAACGCAACTAAAAAAAAACATTATATG-AA-AAAATGGGAGGGGTGCAACACTAGGACTTCCC
1 AAAACGCAACT-AAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCC
* * *
33607 AAAGGTCACCCATCCTAGTACTACTCTCGCCCAAACACGCTTAACTGCGGAGTTCTGATGGGATT
65 AGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
33672 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
130 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
*
33737 CCCCTTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
195 CCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
33802 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
260 ATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
* * *
33845 AAAACGCAACT-AAAAAAAC-TT-TTTTAAAAAAAATAGGGAGGGGTGCAACACGAGGACTT-CC
1 AAAACGCAACTAAAAAAAACATTATATGAAATAAAAT-GGGAGGGGTGCAACACGAGGACTTCCC
33906 AGGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGAT
65 A-GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGAT
33971 CCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT
129 CCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT
34036 GCCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATT
194 GCCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATT
34101 TATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
259 TATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
34145 AAAACGCAACTAAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
1 AAAACGCAACTAAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
*
34210 GAGGTCACCCCATCCCTAGTACTACTCTCG-CCAAGCACGCTTAACTGC-GAATTCTGATGGGAT
66 GAGGTCA-CCCAT-CCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGAT
34273 CCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT
129 CCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT
* * * *
34338 ACCTCTTATCGCACTTGCGCCTCGAATTTAAATACAAATTCGACCAAATATCGTTCCAAATTATT
194 GCCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATT
34403 TATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
259 TATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
* *
34447 AAAACGCAAC-AAAAAAAACATTCTATGAAATAAAATGGAAGGGGTGCAACACGAGGACTTCCCA
1 AAAACGCAACTAAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
34511 GGAGGTCACCCATCCTAGTACTACTCTC-CCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
66 -GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATC
34575 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
130 CGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTG
34640 CCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
195 CCCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTT
34705 ATTTCACAAAACGCAAATAACGAATGAGTT-CAACCACGTGGAG
260 ATTTCACAAAACGCAAATAACGAATGAGTTAC-ACCACGTGGAG
* *
34748 AAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTG-AACCACAAGGACTTCCC
1 AAAACGCAACTAAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAA-CACGAGGACTTCCC
*
34812 AAGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGATTTCTGATGGGAT
65 -AGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGAT
34877 CCGGTGCATTAGTGCTGGTATGATCGCACACCGTCAACTCTTGCGGCAATCTATTCAT
129 CCGGTGCATTAGTGCTGGTATGATCGCAC-CCGTCAACTCTTGC-GCAATCTATTCAT
Statistics
Matches: 1043, Mismatches: 27, Indels: 36
0.94 0.02 0.03
Matches are distributed among these distances:
297 2 0.00
298 4 0.00
299 16 0.02
300 301 0.29
301 270 0.26
302 307 0.29
303 100 0.10
304 30 0.03
305 13 0.01
ACGTcount: A:0.32, C:0.25, G:0.19, T:0.24
Consensus pattern (302 bp):
AAAACGCAACTAAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCC
GGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGC
CCCTTATCACACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTA
TTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAG
Found at i:34743 original size:603 final size:601
Alignment explanation
Indices: 33544--34934 Score: 2481
Period size: 603 Copynumber: 2.3 Consensus size: 601
33534 TTTATTTCAC
*
33544 AAAACGCAACTAAAAAAAAACATTATATG-AAAAAATGGGAGGGGTGCAACACTAGGACTTCCCA
1 AAAACGCAACT-AAAAAAAACATTATATGAAAAAAATGGGAGGGGTGCAACACAAGGACTTCCCA
* * * *
33608 AAGGTCACCCATCCTAGTACTACTCTCGCCCAAACACGCTTAACTGCGGAGTTCTGATGGGATTC
65 GAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAATTCTGATGGGATCC
*
33673 GGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGC
130 GGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTAC
*
33738 CCCTTATCGCACTTGCGCCTCGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTA
195 CCCTTATCGCACTTGCGCCTCGAATTTAAATACAAATTCGACCAAATATCGTTCCAAATTATTTA
* *
33803 TTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACTAAAAAAACTTTT
260 TTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACAAAAAAAACTTTA
* *
33868 TTAAAAAAAATAGGGAGGGGTGCAACACGAGGACTTCCAGGAGGTCACCCATCCTAGTACTACTC
325 TGAAAAAAAATAGGAAGGGGTGCAACACGAGGACTTCCAGGAGGTCACCCATCCTAGTACTACTC
33933 TCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGC
390 TCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGC
33998 ACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCACACTTGCGCCTCGAAT
455 ACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCACACTTGCGCCTCGAAT
34063 TTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATG
520 TTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATG
34128 AGTTACACCACGTGGAG
585 AGTTACACCACGTGGAG
*
34145 AAAACGCAACTAAAAAAAACATTATATGAAATAAAATGGGAGGGGTGCAACACGAGGACTTCCCA
1 AAAACGCAACTAAAAAAAACATTATATGAAA-AAAATGGGAGGGGTGCAACACAAGGACTTCCCA
34210 GAGGTCACCCCATCCCTAGTACTACTCTCG-CCAAGCACGCTTAACTGC-GAATTCTGATGGGAT
65 GAGGTCA-CCCAT-CCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAATTCTGATGGGAT
34273 CCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT
128 CCGGTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCT
*
34338 ACCTCTTATCGCACTTGCGCCTCGAATTTAAATACAAATTCGACCAAATATCGTTCCAAATTATT
193 ACCCCTTATCGCACTTGCGCCTCGAATTTAAATACAAATTCGACCAAATATCGTTCCAAATTATT
34403 TATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACAAAAAAAACAT
258 TATTTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACAAAAAAAAC-T
*
34468 TCTATGAAATAAAAT-GGAAGGGGTGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTAC
322 T-TATGAAAAAAAATAGGAAGGGGTGCAACACGAGGACTT-CCAGGAGGTCACCCATCCTAGTAC
34532 TACTCTC-CCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATG
385 TACTCTCGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATG
34596 ATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCACACTTGCGCCT
450 ATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCACACTTGCGCCT
34661 CGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAAC
515 CGAATTTAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAAC
34726 GAATGAGTT-CAACCACGTGGAG
580 GAATGAGTTAC-ACCACGTGGAG
34748 AAAACGCAACTAAAAAAAACATTATATGAAACAAAATGGGAGGGGTG-AACCACAAGGACTTCCC
1 AAAACGCAACTAAAAAAAACATTATATGAAA-AAAATGGGAGGGGTGCAA-CACAAGGACTTCCC
*
34812 AAGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGATTTCTGATGGGAT
64 -AGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAATTCTGATGGGAT
34877 CCGGTGCATTAGTGCTGGTATGATCGCACACCGTCAACTCTTGCGGCAATCTATTCAT
128 CCGGTGCATTAGTGCTGGTATGATCGCAC-CCGTCAACTCTTGC-GCAATCTATTCAT
Statistics
Matches: 760, Mismatches: 16, Indels: 23
0.95 0.02 0.03
Matches are distributed among these distances:
600 17 0.02
601 13 0.02
602 259 0.34
603 336 0.44
604 108 0.14
605 14 0.02
606 13 0.02
ACGTcount: A:0.32, C:0.25, G:0.19, T:0.24
Consensus pattern (601 bp):
AAAACGCAACTAAAAAAAACATTATATGAAAAAAATGGGAGGGGTGCAACACAAGGACTTCCCAG
AGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTGCGGAATTCTGATGGGATCCG
GTGCATTAGTGCTGGTATGATCGCACCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTACC
CCTTATCGCACTTGCGCCTCGAATTTAAATACAAATTCGACCAAATATCGTTCCAAATTATTTAT
TTCACAAAACGCAAATAACGAATGAGTTACACCACGTGGAGAAAACGCAACAAAAAAAACTTTAT
GAAAAAAAATAGGAAGGGGTGCAACACGAGGACTTCCAGGAGGTCACCCATCCTAGTACTACTCT
CGCCCAAGCACGCTTAACTGCGGAGTTCTGATGGGATCCGGTGCATTAGTGCTGGTATGATCGCA
CCCGTCAACTCTTGCGCAATCTATTCATATAAAGGCTGCCCCTTATCACACTTGCGCCTCGAATT
TAAATGCAAATTCGACCAAATATCGTTCCAAATTATTTATTTCACAAAACGCAAATAACGAATGA
GTTACACCACGTGGAG
Done.