Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold872
Parameters: 2 7 7 80 10 50 1000
Length:  49038

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12--2821
620
4.5
617
76
16
2335
30
16
20
33
1.94
2825--4386
625
2.5
627
83
9
1834
31
16
19
32
1.94
12783--12911
39
3.2
40
80
7
156
24
19
27
28
1.99
13371--13481
38
2.9
38
78
10
111
29
26
21
22
1.99
20306--20489
40
4.6
39
77
8
165
27
27
21
23
1.99
20269--20489
80
2.8
80
78
7
193
26
27
21
24
1.99
20309--20489
80
2.3
80
83
9
210
27
27
21
23
1.99
22021--23641
646
2.5
646
92
0
2627
33
19
15
31
1.93
23166--24110
473
2.0
473
93
0
1604
33
19
16
30
1.94
23639--37625
644
21.9
646
95
2
25061
34
20
15
29
1.93
33963--46244
647
19.1
645
96
1
22642
34
20
15
29
1.94

Tables:   1

The End!