Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1101
Parameters: 2 7 7 80 10 50 1000
Length:  35611

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3062--3243
101
1.8
101
86
0
265
27
18
24
29
1.98
3058--3304
50
4.9
50
77
3
253
27
18
25
29
1.98
3861--4219
180
2.0
180
85
5
494
38
8
18
34
1.80
6711--6874
42
3.9
42
81
1
184
31
15
23
29
1.95
17843--17891
20
2.4
20
86
3
62
38
10
0
51
1.36
17854--17892
20
2.0
20
94
0
69
35
10
0
53
1.35
19502--19687
41
4.6
41
88
3
243
25
26
23
24
2.00
27426--27633
40
5.2
40
86
4
116
25
27
23
23
2.00
27449--27633
40
4.6
41
89
4
252
24
26
24
24
2.00
31379--31498
56
2.1
56
100
0
240
44
9
24
22
1.82
32619--32840
40
5.6
40
85
6
274
24
22
27
25
2.00
32619--32840
79
2.8
79
84
6
254
24
22
27
25
2.00

Tables:   1

The End!