Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1954
Parameters: 2 7 7 80 10 50 1000
Length:  69717

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--39870
608
65.6
608
99
0
78770
33
23
17
25
1.96
41095--41262
80
2.1
80
81
5
189
27
27
19
25
1.99
41135--41315
80
2.3
80
83
9
210
28
27
20
23
1.99
41132--41315
40
4.6
40
81
7
187
28
27
20
23
1.99
49018--49237
79
2.8
79
79
10
191
27
26
20
25
1.99
49058--49237
40
4.5
40
78
8
154
28
26
21
23
1.99
51241--51393
78
1.9
79
93
1
263
28
27
22
20
1.99
51775--51839
30
2.1
31
85
2
87
32
26
6
35
1.81
53489--62947
607
15.7
608
93
3
16347
33
23
17
25
1.96
59550--62947
608
5.6
608
95
1
6016
33
22
17
26
1.96
64148--64517
103
3.6
104
93
3
638
30
30
20
18
1.97
64388--64439
26
2.0
26
96
0
95
28
34
23
13
1.92
64844--64907
30
2.2
29
81
10
76
29
28
6
35
1.82
64851--64907
30
1.9
30
85
3
80
29
24
7
38
1.82

Tables:   1

The End!