Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1095
Parameters: 2 7 7 80 10 50 1000
Length:  34467

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58--116
18
3.2
19
79
13
70
61
6
0
32
1.22
61--103
17
2.6
17
85
10
54
62
4
0
32
1.15
318--404
30
3.0
28
71
18
72
66
1
3
28
1.15
359--404
9
5.2
9
80
12
51
69
0
2
28
1.00
320--401
12
6.8
12
74
17
55
67
1
3
28
1.15
328--405
27
2.7
29
79
16
83
67
1
3
26
1.15
733--793
25
2.4
25
78
13
70
68
24
1
4
1.18
733--776
23
2.0
22
95
4
79
70
25
0
4
1.06
734--814
23
3.5
23
77
14
69
62
27
1
8
1.31
1272--1422
40
3.8
40
80
4
187
27
20
20
31
1.98
1266--1423
82
1.9
82
89
2
246
27
19
20
32
1.97
1276--1446
82
2.1
82
82
4
202
27
21
18
32
1.97
1583--2552
133
7.3
133
94
1
1604
28
23
21
26
1.99
1583--2552
267
3.6
268
94
1
1671
28
23
21
26
1.99
1583--2552
400
2.4
400
94
1
1685
28
23
21
26
1.99
2518--3064
44
12.4
45
74
4
436
31
25
17
26
1.97
2518--3069
132
4.2
132
92
0
899
30
25
16
27
1.97
13970--13999
12
2.5
12
94
0
51
46
0
6
46
1.29
14084--14126
17
2.6
17
85
10
54
62
4
0
32
1.15
14081--14131
18
2.8
19
80
14
63
60
7
0
31
1.25
14345--14427
3
28.3
3
73
20
54
66
1
3
28
1.16
14343--14424
12
6.5
12
73
17
60
65
1
3
29
1.17
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18662--18699
17
2.1
19
85
9
53
52
2
2
42
1.29
22053--22106
26
2.0
28
92
7
94
9
25
0
64
1.23
24021--24088
35
1.9
35
84
0
91
29
23
23
23
1.99
29265--29300
18
2.0
18
100
0
72
50
0
16
33
1.46

Tables:   1

The End!