Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2152
Parameters: 2 7 7 80 10 50 1000
Length:  45314

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3590--3733
40
3.6
40
85
5
159
27
28
22
22
1.99
11452--11595
40
3.6
40
85
5
159
27
28
22
22
1.99
13787--13832
8
5.8
8
80
10
58
50
21
21
6
1.71
13792--13835
16
2.8
16
92
0
70
45
22
22
9
1.80
14081--14145
28
2.3
28
92
5
105
33
29
7
29
1.85
14251--14351
27
3.6
28
82
4
123
19
25
21
32
1.97
17245--17561
48
6.7
47
72
14
199
28
20
28
23
1.99
17245--17511
93
2.9
93
82
9
280
27
20
28
22
1.99
25527--25567
22
2.0
20
85
9
55
70
9
4
14
1.30
29082--29128
21
2.2
21
96
0
85
29
14
6
48
1.69
29309--29347
19
2.0
20
85
9
55
17
23
10
48
1.78
30005--30062
20
2.8
21
74
10
57
34
24
12
29
1.91
35349--35504
27
5.7
27
80
6
163
28
27
17
26
1.98
35349--35504
82
1.9
81
85
3
215
28
27
17
26
1.98
43401--43578
27
6.6
27
79
3
115
28
28
16
26
1.97
43401--43578
54
3.3
55
80
10
204
28
28
16
26
1.97
43422--43577
82
1.9
81
85
3
215
28
28
16
26
1.97

Tables:   1

The End!