Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2631
Parameters: 2 7 7 80 10 50 1000
Length:  14021

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
541--589
16
3.3
15
86
11
57
65
2
2
30
1.15
541--582
8
5.7
7
84
15
50
66
2
0
30
1.04
791--853
26
2.4
26
81
2
72
61
4
4
28
1.36
737--873
25
5.5
24
70
16
91
57
4
6
31
1.44
907--952
25
1.9
25
86
8
69
60
0
4
34
1.16
1432--1586
28
5.8
28
81
16
186
23
3
48
24
1.67
1463--1506
21
2.1
21
87
8
63
27
4
45
22
1.72
1483--1532
16
3.4
16
71
21
54
24
4
48
24
1.68
1435--1586
55
2.9
50
87
11
193
23
3
48
24
1.68
2262--2312
14
3.6
14
77
12
50
64
3
11
19
1.41
2178--2385
104
2.0
104
83
3
267
44
17
15
21
1.86
2329--3283
72
12.5
74
69
18
473
34
20
16
28
1.95
2440--2605
91
1.8
91
87
5
246
36
19
15
28
1.93
2753--2780
14
2.0
14
100
0
56
57
7
21
14
1.61
2284--3210
232
4.0
237
91
4
1485
34
20
16
27
1.95
11266--11301
12
3.0
12
95
0
63
41
5
25
27
1.77
12819--12866
16
3.1
15
90
6
69
64
2
2
31
1.16
12815--12870
24
2.3
24
81
6
69
66
1
1
30
1.12
12815--12866
8
6.5
8
82
8
61
65
1
1
30
1.14
13091--13137
14
3.3
14
75
16
51
63
2
2
31
1.18
13068--13145
31
2.5
31
81
6
79
58
3
5
32
1.38
13009--13230
25
9.0
25
71
14
115
56
4
5
33
1.42
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13009--13213
50
4.0
50
72
14
127
55
4
5
34
1.44
13708--13820
29
3.8
30
91
4
194
20
3
49
26
1.65

Tables:   1

The End!