Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2421
Parameters: 2 7 7 80 10 50 1000
Length:  40726

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
548--644
30
3.2
30
75
2
106
27
26
16
28
1.97
2363--2399
12
2.9
13
84
15
51
72
8
5
13
1.24
3318--3387
21
3.3
20
72
18
54
77
2
17
2
1.02
3322--3387
26
2.6
25
76
13
71
77
3
16
3
1.02
3437--3467
12
2.6
12
100
0
62
45
12
16
25
1.83
6280--6332
23
2.4
22
76
20
56
9
18
1
69
1.25
9700--9750
11
4.7
11
83
9
61
13
1
5
78
1.02
9699--9751
23
2.4
21
87
6
70
13
1
5
79
0.99
15116--15173
18
3.1
18
73
11
62
6
15
3
74
1.17
16104--16131
13
2.2
13
100
0
56
14
0
7
78
0.95
22527--22563
18
2.1
18
90
5
58
40
0
10
48
1.38
27300--27362
33
1.9
33
84
12
85
12
26
6
53
1.62
27360--27415
21
2.7
21
72
5
51
8
17
1
71
1.21
27379--27514
18
7.6
17
70
19
64
8
19
2
69
1.27
27359--27415
14
4.1
14
75
16
57
8
17
1
71
1.19
27377--27484
6
17.7
6
70
5
74
6
18
3
71
1.23
28524--28567
13
3.5
13
90
6
72
27
2
4
65
1.23
28528--28559
12
2.7
12
100
0
64
18
0
6
75
1.01
30381--30418
15
2.5
15
100
0
76
68
0
10
21
1.19
30394--30510
42
2.9
40
76
11
112
70
2
13
12
1.26
33277--33313
18
2.1
18
90
5
58
40
0
10
48
1.38

Tables:   1

The End!