Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1878
Parameters: 2 7 7 80 10 50 1000
Length:  29593

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2448--2504
10
5.8
10
81
2
62
36
24
12
26
1.91
2448--2504
20
2.9
20
94
2
98
36
24
12
26
1.91
2442--2503
30
2.1
29
87
3
88
35
24
11
29
1.90
3580--3641
10
5.9
10
74
10
52
33
32
3
30
1.74
3580--3642
21
3.0
21
88
2
90
33
33
3
30
1.74
3940--3975
14
2.5
15
90
4
56
80
2
5
11
0.98
3951--3993
18
2.4
18
92
0
68
79
2
6
11
1.02
3940--3995
15
3.6
15
73
15
51
75
1
7
16
1.11
6172--6223
19
2.7
19
84
3
59
75
1
15
7
1.12
6233--6262
15
2.1
15
93
6
53
73
0
20
6
1.05
10315--10376
10
5.9
10
74
10
52
33
32
3
30
1.74
10315--10377
21
3.0
21
88
2
90
33
33
3
30
1.74
12662--12714
23
2.4
22
76
20
56
9
16
1
71
1.21
22200--22252
14
3.9
14
92
7
92
64
0
13
22
1.28
22200--22252
27
2.0
28
92
7
92
64
0
13
22
1.28

Tables:   1

The End!