Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3118
Parameters: 2 7 7 80 10 50 1000
Length:  34603

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8802--8839
3
12.7
3
88
0
58
65
2
2
28
1.19
12701--12729
5
5.8
5
100
0
58
0
17
0
82
0.66
16495--16587
39
2.5
37
80
7
98
27
29
22
20
1.98
16942--16977
3
12.0
3
87
0
54
61
5
0
33
1.19
16942--16977
12
3.0
12
95
0
63
61
5
0
33
1.19
17629--17654
11
2.4
11
100
0
52
0
42
7
50
1.31
18012--18054
21
2.0
21
81
0
50
58
6
0
34
1.25
23072--23114
21
2.0
21
82
8
52
23
20
4
51
1.66
24158--24250
39
2.5
37
80
7
98
27
29
22
20
1.98
24605--24640
3
12.0
3
87
0
54
61
5
0
33
1.19
24605--24640
12
3.0
12
95
0
63
61
5
0
33
1.19
25293--25318
11
2.4
11
100
0
52
0
42
7
50
1.31
25676--25718
21
2.0
21
81
0
50
58
6
0
34
1.25

Tables:   1

The End!