Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2659
Parameters: 2 7 7 80 10 50 1000
Length:  28762

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6111--6172
32
1.9
32
96
0
115
29
9
22
38
1.86
13931--13992
5
12.0
5
76
17
56
46
17
1
33
1.58
13930--14006
11
7.5
11
79
15
94
46
18
1
33
1.57
13930--14006
20
3.8
21
83
16
108
46
18
1
33
1.57
13998--14034
18
2.1
18
94
0
65
62
5
8
24
1.44
13934--14007
6
13.2
6
76
21
72
47
17
1
33
1.56
16226--16262
18
2.1
18
94
0
65
24
8
5
62
1.44
16253--16326
6
13.2
6
78
18
72
33
1
17
47
1.56
16230--16324
11
8.5
11
70
17
61
32
3
13
50
1.57
16248--16326
30
2.6
30
83
13
99
32
2
16
48
1.60
16268--16329
5
12.0
5
76
17
56
33
1
17
46
1.58
16254--16330
20
3.8
21
83
16
108
33
1
18
46
1.57

Tables:   1

The End!