Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2544
Parameters: 2 7 7 80 10 50 1000
Length:  34964

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4239--4265
4
6.8
4
100
0
54
77
0
0
22
0.76
13943--14007
29
2.2
31
86
10
91
32
9
21
36
1.85
15266--15401
64
2.1
64
83
4
166
29
8
12
49
1.71
15380--15415
14
2.6
14
95
0
63
25
11
2
61
1.43
15888--15927
18
2.2
18
86
4
53
12
27
0
60
1.33
16981--17015
13
2.6
13
90
4
52
20
8
0
71
1.11
16980--17022
14
2.9
15
89
3
70
23
11
0
65
1.25
17065--17114
10
4.7
10
87
9
64
14
0
10
76
1.03
17064--17115
11
4.7
11
90
7
79
13
0
9
76
1.01
17063--17115
12
4.7
12
88
9
76
13
0
9
77
0.99
17065--17114
21
2.3
21
93
3
82
14
0
10
76
1.03
19005--19036
16
2.0
16
100
0
64
12
12
25
50
1.75
19223--19370
72
2.0
73
81
3
174
25
17
29
28
1.97
22446--22472
14
1.9
14
100
0
54
59
33
0
7
1.25
23474--23522
22
2.2
23
82
10
66
42
18
8
30
1.79
31194--31227
13
2.7
13
95
4
61
73
0
5
20
1.04
33096--33135
16
2.4
18
80
16
50
15
25
5
55
1.60

Tables:   1

The End!