Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3235
Parameters: 2 7 7 80 10 50 1000
Length:  30342

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1101--1149
25
1.9
25
84
12
64
32
2
10
55
1.45
4639--4663
12
2.1
12
100
0
50
16
8
16
60
1.58
9859--9916
22
2.6
22
80
0
62
17
25
15
41
1.89
9887--9948
29
2.1
29
93
0
106
14
19
22
43
1.87
9914--9969
22
2.6
21
77
5
58
17
17
19
44
1.87
13720--13764
22
2.0
22
86
4
63
37
17
6
37
1.76
16521--16557
17
2.2
16
95
4
65
16
0
18
64
1.29
17095--17156
8
7.8
8
70
0
52
51
3
0
45
1.17
17095--17167
24
3.0
24
97
0
137
50
2
0
46
1.15
17987--18016
6
5.0
6
100
0
60
83
0
16
0
0.65
21797--22011
36
5.1
45
74
20
232
35
13
20
30
1.91
21797--22030
82
2.9
82
94
1
393
35
12
21
29
1.91
25418--25493
23
3.3
23
96
0
143
21
21
26
31
1.98

Tables:   1

The End!