Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3781
Parameters: 2 7 7 80 10 50 1000
Length:  34678

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
696--733
11
3.5
11
82
3
51
36
0
0
63
0.95
9507--9538
14
2.3
14
100
0
64
6
15
46
31
1.71
14604--14635
14
2.3
14
100
0
64
6
15
46
31
1.71
15522--15813
42
6.9
42
80
9
319
17
28
34
19
1.95
16022--16100
24
3.3
24
85
5
106
6
37
35
20
1.78
16105--17112
43
23.9
43
77
6
958
16
32
33
17
1.93
16105--17112
85
12.0
86
82
4
958
16
32
33
17
1.93
16105--17112
128
8.0
127
77
5
942
16
32
33
17
1.93
16176--16907
298
2.5
299
91
2
1165
16
32
32
18
1.93
17041--17119
34
2.3
34
93
2
131
7
35
37
18
1.80
17118--17166
25
2.0
25
91
0
80
12
22
46
18
1.82
17154--17246
42
2.2
44
90
3
145
12
27
39
19
1.88
25148--25439
42
6.9
42
80
9
319
17
28
34
19
1.95
25648--25726
24
3.3
24
85
5
106
6
37
35
20
1.78
25731--26741
43
23.9
43
78
6
994
16
32
33
17
1.93
25731--26741
85
12.0
86
82
3
994
16
32
33
17
1.93
25744--26770
256
4.1
253
84
5
1054
16
32
33
17
1.93
25802--26741
299
3.2
299
87
4
1209
16
32
33
17
1.93
26670--26748
34
2.3
34
93
2
131
7
35
37
18
1.80
26747--26795
25
2.0
25
91
0
80
12
22
46
18
1.82
26783--26875
42
2.2
44
90
3
145
12
27
39
19
1.88

Tables:   1

The End!