Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold539
Parameters: 2 7 7 80 10 50 1000
Length:  19402

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1379--1600
39
5.7
40
82
7
240
25
27
21
25
1.99
1379--1600
79
2.8
77
81
6
250
25
27
21
25
1.99
1346--1600
39
6.5
39
80
8
234
24
27
21
26
1.99
1532--1609
40
1.9
41
82
10
97
26
28
20
24
1.99
4353--4391
20
2.0
20
95
5
71
43
30
5
20
1.73
8841--9009
77
2.2
78
82
6
209
24
27
21
26
1.99
8841--9062
39
5.7
38
81
10
195
25
27
21
26
1.99
8879--9062
79
2.3
79
81
9
207
25
27
21
26
1.99
8994--9071
40
1.9
41
82
10
97
26
28
20
24
1.99
12224--12277
27
2.0
27
92
0
90
20
20
16
42
1.89
15504--15676
39
4.4
39
89
0
265
26
26
22
24
2.00
15476--15683
78
2.7
79
87
3
305
25
25
22
25
2.00

Tables:   1

The End!