Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold850
Parameters: 2 7 7 80 10 50 1000
Length:  46325

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14539--14672
3
43.0
3
73
11
83
55
2
9
32
1.44
14764--14796
15
2.2
15
94
0
57
63
6
3
27
1.32
14764--14837
3
24.7
3
69
5
51
60
4
5
29
1.37
15896--15972
38
2.1
37
87
2
109
12
1
37
48
1.50
16521--16646
64
2.0
64
93
0
216
32
22
18
26
1.97
16585--16897
75
4.2
75
91
1
457
34
17
15
31
1.92
27006--27177
93
1.8
93
91
0
281
29
27
20
22
1.98
26999--27172
46
3.8
46
73
13
158
29
28
19
22
1.98
29804--29856
26
1.9
26
81
11
61
66
0
3
30
1.10
29998--30049
22
2.4
21
87
6
68
65
3
3
26
1.27
29900--30032
3
44.0
3
68
12
67
60
0
7
30
1.29
30213--30434
3
74.0
3
67
11
89
58
2
7
31
1.40
32371--32478
45
2.4
45
83
8
125
26
26
23
23
2.00
32843--32883
16
2.6
16
96
0
73
29
29
31
9
1.89
32885--33008
38
3.3
38
90
0
185
29
26
21
22
1.99
38542--38606
30
2.2
30
91
2
105
9
1
47
41
1.45
38552--38606
15
3.7
15
100
0
110
7
0
49
43
1.30
38552--38606
7
7.4
7
76
11
56
7
0
49
43
1.30
38558--38600
8
5.6
8
78
10
54
4
0
48
46
1.22
38786--38972
44
4.4
41
74
10
160
28
20
21
28
1.98
38816--39013
44
4.6
44
74
8
172
27
21
19
31
1.98
38789--39183
129
3.1
127
86
5
514
27
20
21
30
1.98

Tables:   1

The End!