Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3404
Parameters: 2 7 7 80 10 50 1000
Length:  37100

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1262--1306
12
3.8
12
80
11
56
8
26
0
64
1.23
1262--1306
24
1.9
23
86
4
63
8
26
0
64
1.23
9683--9720
20
2.0
20
89
5
60
36
18
21
23
1.95
10216--10269
28
2.0
27
85
3
72
18
9
14
57
1.64
11616--11649
13
2.6
13
95
0
59
82
2
2
11
0.89
11627--11664
16
2.3
17
86
4
51
78
2
10
7
1.04
17013--17141
46
2.8
46
90
0
186
31
28
19
20
1.97
21395--21438
12
3.7
12
81
0
52
9
22
0
68
1.18
21388--21438
24
2.1
24
85
0
66
13
21
0
64
1.28
21440--21483
12
3.7
12
100
0
88
25
15
13
45
1.83
21477--21535
27
2.2
27
100
0
118
23
25
6
44
1.78
21558--21614
5
11.0
5
75
20
55
1
17
3
77
1.00
21558--21614
16
3.7
14
82
15
60
1
17
3
77
1.00
21558--21625
21
3.2
21
76
15
61
1
17
4
76
1.03
28964--29065
30
3.4
29
72
7
98
31
15
25
27
1.96
31299--31348
6
8.2
6
81
16
50
2
20
2
76
0.99
31288--31358
37
1.9
37
86
11
101
2
18
2
76
1.04
31284--31344
16
3.8
16
77
14
63
3
19
1
75
1.03
34036--34132
30
3.2
30
72
8
99
28
16
26
27
1.97
35951--36012
31
2.0
31
96
3
117
24
32
9
33
1.88

Tables:   1

The End!