Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold995
Parameters: 2 7 7 80 10 50 1000
Length:  32125

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
830--892
33
1.9
33
84
12
85
12
26
6
53
1.62
889--944
13
4.2
13
72
17
51
8
17
1
71
1.21
889--944
14
4.2
13
78
13
60
8
17
1
71
1.21
889--945
27
2.2
26
87
9
80
8
19
1
70
1.23
889--1026
12
11.4
12
70
16
81
9
18
2
69
1.28
908--1008
18
5.5
18
74
7
87
7
16
2
72
1.21
908--1012
6
17.3
6
67
7
61
7
17
2
72
1.20
871--1034
12
13.7
12
67
14
52
10
19
3
67
1.34
3879--3918
11
3.5
11
89
3
53
5
5
5
85
0.85
3871--3918
24
2.0
24
88
8
71
6
8
4
81
0.98
3929--3962
18
1.9
17
100
0
59
14
5
8
70
1.31
6175--6200
8
3.2
8
100
0
52
23
38
0
38
1.55
6989--7033
14
3.3
14
78
6
56
35
0
15
48
1.45
8009--8067
28
2.1
29
87
3
84
42
27
0
30
1.56
8285--8326
19
2.2
19
87
8
59
78
4
7
9
1.08
9227--9275
18
2.7
18
87
0
71
59
0
26
14
1.36
9227--9296
24
2.9
24
78
0
59
57
0
28
14
1.38
11749--11793
14
3.3
14
78
6
56
35
0
15
48
1.45
12770--12829
29
2.1
29
90
0
93
41
28
0
30
1.56
12776--12823
15
3.3
15
73
5
53
43
25
0
31
1.55
15441--15515
35
2.2
33
83
9
89
6
18
4
70
1.25
19014--19120
56
1.9
56
86
3
153
25
21
13
40
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22567--22607
15
2.7
16
74
11
50
7
26
0
65
1.18
22765--22803
15
2.4
15
87
12
51
10
20
2
66
1.33
25316--25350
18
1.9
18
88
11
54
57
20
0
22
1.41
25411--25503
19
5.1
19
73
12
86
48
13
7
30
1.71
25401--25514
54
2.1
54
93
0
192
44
14
7
33
1.73
25492--25548
26
2.2
26
96
0
105
38
10
14
36
1.80
27993--28146
28
5.5
28
95
0
256
25
11
29
33
1.91
27968--28146
56
3.2
56
90
1
261
25
11
29
33
1.91

Tables:   1

The End!