Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2638
Parameters: 2 7 7 80 10 50 1000
Length:  30082

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4345--4385
17
2.4
18
80
8
50
14
24
4
56
1.58
4316--4369
24
2.2
25
78
15
60
11
22
3
62
1.43
6617--6656
14
3.1
14
89
10
59
10
7
5
77
1.11
8437--8484
22
2.2
22
85
3
62
58
2
25
14
1.48
8508--8550
20
2.2
20
86
0
59
53
2
30
13
1.53
12315--12358
22
2.0
22
95
0
79
25
36
4
34
1.76
12986--13040
24
2.3
24
96
0
101
34
27
10
27
1.90
13114--13148
17
2.0
18
88
5
54
45
14
2
37
1.59
13403--13427
9
2.8
9
100
0
50
48
12
0
40
1.40
17125--17187
21
3.0
21
88
2
81
33
31
4
30
1.78
17487--17537
14
3.6
14
86
7
59
70
1
7
19
1.21
19131--19176
20
2.3
20
84
0
56
23
19
17
39
1.92
19123--19196
30
2.5
30
84
8
80
22
20
18
37
1.94
20779--20808
11
2.7
11
89
0
51
80
6
0
13
0.91
21899--22016
12
9.8
12
68
18
50
70
3
18
7
1.26
21916--22019
18
5.6
18
75
5
82
71
3
18
6
1.24
21912--22019
6
17.7
6
70
6
74
71
3
18
6
1.23
21980--22017
13
2.8
13
82
17
51
73
0
18
7
1.06
21981--22031
21
2.4
21
74
6
50
74
1
17
5
1.11
22034--22096
33
1.9
33
84
12
85
55
6
25
12
1.60
23870--23923
20
2.7
20
82
0
63
24
20
18
37
1.94
23870--23943
30
2.5
30
86
8
98
21
20
18
39
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23870--23934
20
3.2
20
71
16
53
23
21
16
38
1.93
25528--25560
13
2.6
13
85
4
50
78
6
3
12
1.04
25568--25648
28
2.9
28
78
12
85
71
4
14
8
1.27
26657--26772
12
9.6
12
73
18
73
73
4
17
5
1.18
26661--26760
18
5.3
18
80
8
83
73
4
17
6
1.20
26657--26760
6
16.7
6
72
10
75
73
3
17
5
1.19
26713--26772
14
4.3
14
73
14
52
73
1
20
5
1.11
26775--26837
33
1.9
33
84
12
85
55
6
25
12
1.60
28611--28656
20
2.3
20
84
0
56
23
19
17
39
1.92
28604--28676
30
2.5
30
86
6
96
21
20
19
38
1.94

Tables:   1

The End!