Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3533
Parameters: 2 7 7 80 10 50 1000
Length:  32614

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8509--8546
18
2.2
17
86
9
51
21
7
2
68
1.28
9837--9904
26
2.6
25
84
11
75
73
1
23
1
1.00
14334--14385
22
2.4
22
96
0
95
44
13
3
38
1.62
14664--14710
5
9.6
5
78
21
55
40
0
0
59
0.97
14663--14708
8
5.5
8
87
7
65
39
0
0
60
0.97
14669--14710
13
3.0
13
81
18
57
40
0
0
59
0.97
19904--20018
57
2.0
57
96
0
212
18
18
21
41
1.90
21080--21114
10
3.7
10
85
14
56
51
8
0
40
1.33
21079--21153
18
4.3
18
72
13
75
46
13
1
38
1.51
21325--21358
17
1.9
18
88
5
52
61
0
0
38
0.96
29453--29485
17
1.9
17
93
0
57
45
6
33
15
1.70

Tables:   1

The End!