Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3717
Parameters: 2 7 7 80 10 50 1000
Length:  38190

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1605--1665
10
6.1
10
74
12
54
32
13
24
29
1.93
1606--1666
20
3.0
20
83
9
79
32
13
26
27
1.93
3719--3784
12
4.9
12
72
22
51
15
18
0
66
1.25
3718--3784
28
2.4
27
83
11
84
14
17
0
67
1.24
4622--4651
15
2.0
15
100
0
60
6
13
0
80
0.91
4624--4696
14
5.5
12
76
20
58
4
10
1
83
0.84
4624--4675
20
2.6
19
85
8
68
3
11
0
84
0.74
4628--4707
11
7.8
10
79
13
67
6
10
2
81
0.96
4640--4719
11
7.8
10
75
15
58
7
8
2
81
0.96
4666--4728
11
5.5
11
81
7
72
9
4
4
80
0.99
6052--6112
10
6.1
10
74
12
54
32
13
24
29
1.93
6053--6113
20
3.0
20
83
9
79
32
13
26
27
1.93
21258--21317
29
2.1
29
93
0
102
41
30
0
28
1.56
21264--21311
15
3.3
15
73
5
53
43
27
0
29
1.55
21562--21595
16
2.0
18
88
11
54
67
11
5
14
1.39
22625--22680
30
1.9
28
85
7
76
53
3
30
12
1.55
28006--28046
12
3.2
12
87
12
64
14
0
7
78
0.96
28013--28046
14
2.4
14
100
0
68
11
0
5
82
0.83
32066--32125
29
2.1
29
90
0
93
41
28
0
30
1.56
32072--32119
15
3.3
15
73
5
53
43
25
0
31
1.55
33026--33122
30
3.2
30
71
8
90
27
15
28
27
1.96
35215--35298
29
2.8
30
76
16
93
13
22
1
63
1.36
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35232--35285
28
1.9
28
85
7
74
12
24
1
61
1.42
35274--35298
12
2.1
12
100
0
50
8
16
0
76
1.02
35369--35434
13
4.6
13
77
22
62
1
16
1
80
0.87
35367--35426
5
12.2
5
78
16
63
1
16
1
80
0.89
35367--35428
24
2.5
24
83
16
83
1
16
1
80
0.87
36327--36383
13
4.5
13
77
16
66
17
5
5
71
1.23
38061--38156
30
3.2
30
72
7
97
28
15
29
27
1.96

Tables:   1

The End!