Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1398
Parameters: 2 7 7 80 10 50 1000
Length:  18000

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1159--1197
20
2.0
20
90
10
62
15
17
7
58
1.59
1446--1593
50
3.0
50
80
0
161
22
27
21
27
1.99
5071--5109
11
3.6
11
96
3
71
38
20
0
41
1.53
5060--5109
5
9.6
5
82
8
64
40
18
0
42
1.50
5060--5109
16
3.2
15
83
10
64
40
18
0
42
1.50
5256--5306
20
2.5
20
100
0
102
37
9
0
52
1.34
5254--5305
9
5.2
10
75
15
54
34
9
0
55
1.32
5656--5704
22
2.2
22
77
0
53
22
18
0
59
1.38
8550--8727
27
6.6
27
82
3
115
29
28
15
26
1.96
8571--8726
82
1.9
81
88
3
233
29
28
15
26
1.96
8550--8726
54
3.3
54
81
6
205
29
28
15
26
1.96
16339--16516
27
6.6
27
84
3
205
29
28
15
26
1.96
16360--16515
82
1.9
81
88
3
233
29
28
15
26
1.96

Tables:   1

The End!