Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2623
Parameters: 2 7 7 80 10 50 1000
Length:  31079

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
464--602
40
3.5
39
81
12
158
25
28
20
25
1.99
491--601
40
2.8
39
86
6
159
26
27
18
27
1.98
8432--8616
79
2.3
82
84
7
238
25
27
22
24
2.00
8413--8616
40
5.1
40
82
8
238
25
27
22
25
2.00
10500--10564
28
2.3
28
94
0
112
33
27
7
30
1.85
10670--10759
28
3.2
27
81
7
101
20
24
23
32
1.98
10682--10759
27
2.8
28
80
5
95
21
25
20
32
1.98
11223--11261
19
2.1
19
85
0
51
15
5
7
71
1.26
15916--16022
55
2.0
55
90
1
171
42
14
14
28
1.85
17054--17231
27
6.6
27
84
3
205
26
14
28
29
1.95
17054--17231
54
3.3
55
84
4
227
26
14
28
29
1.95
25508--25596
46
1.9
47
93
2
153
29
25
17
26
1.98
25542--25910
132
2.8
132
86
2
508
26
22
21
29
1.99

Tables:   1

The End!