Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1027
Parameters: 2 7 7 80 10 50 1000
Length:  86203

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7273--7308
17
2.1
17
89
0
54
50
0
16
33
1.46
7268--7318
18
2.8
18
79
11
59
50
0
11
37
1.39
8689--8789
29
3.5
29
84
1
132
26
12
29
30
1.93
15951--16049
29
3.4
29
86
4
130
27
14
28
30
1.95
20254--20286
16
2.0
16
94
5
57
54
0
39
6
1.25
21683--21732
24
2.0
25
84
3
66
52
4
8
36
1.50
21787--21873
42
2.0
42
80
10
97
58
4
4
32
1.39
21851--21888
15
2.5
15
91
0
58
60
0
2
36
1.11
21885--21918
16
2.0
18
88
11
54
67
0
2
29
1.05
21850--21909
13
4.9
12
80
11
61
63
0
1
35
1.05
22318--22377
30
2.0
30
83
0
75
58
6
10
25
1.55
23686--24227
220
2.4
220
90
1
823
28
21
17
32
1.96
28531--28565
18
2.0
17
88
5
52
31
31
11
25
1.91
40068--40104
10
3.5
11
85
10
51
16
8
24
51
1.71
41972--42255
50
5.8
50
73
9
228
29
20
27
22
1.98
41986--42255
95
2.8
97
82
5
298
28
21
27
22
1.99
49980--50012
16
2.1
15
94
5
57
21
0
0
78
0.75
50668--50707
21
2.0
21
90
5
64
12
30
22
35
1.91
51078--51105
4
7.0
4
100
0
56
50
25
0
25
1.50
61135--61170
17
2.1
17
89
0
54
50
0
16
33
1.46
61130--61180
18
2.8
18
79
11
59
50
0
11
37
1.39
62551--62651
29
3.5
29
84
1
132
26
12
29
30
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
69818--69916
29
3.4
29
86
4
130
27
14
28
30
1.95
74117--74149
16
2.0
16
94
5
57
54
0
39
6
1.25
76007--76056
24
2.0
25
84
3
66
52
4
8
36
1.50
76175--76232
13
4.4
14
73
18
61
62
0
1
36
1.06
76176--76224
27
1.9
26
88
12
75
61
0
2
36
1.08
76209--76242
16
2.0
18
88
11
54
67
0
2
29
1.05
76175--76234
14
4.5
13
76
15
61
61
0
1
36
1.06
77396--77937
220
2.4
220
90
2
816
27
21
17
33
1.96
80914--81092
40
4.5
40
80
9
156
24
21
27
26
1.99
80914--81092
78
2.3
81
83
11
212
24
21
27
26
1.99
80977--81095
40
3.0
39
86
4
166
23
20
27
28
1.99
80993--81142
40
3.8
38
80
8
122
24
22
28
24
1.99
85228--85291
28
2.3
28
88
0
92
29
6
7
56
1.52

Tables:   1

The End!