Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1274
Parameters: 2 7 7 80 10 50 1000
Length:  17518

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9043--9086
22
2.0
22
86
4
61
38
18
6
36
1.77
9065--9190
19
6.9
19
84
10
183
36
14
10
38
1.80
9065--9182
35
3.3
35
82
12
143
36
13
11
38
1.80
9065--9190
54
2.3
54
98
0
243
36
14
10
38
1.80
9068--9198
17
7.3
19
79
14
127
37
12
11
38
1.80
9309--9347
21
1.9
20
84
5
51
10
2
15
71
1.23
14394--14441
25
1.9
25
91
0
78
35
25
14
25
1.94
14488--14544
11
5.5
11
70
16
50
35
12
19
33
1.89
14478--14544
20
3.3
20
87
0
98
34
11
20
32
1.90
14595--14642
22
2.1
23
88
3
71
29
20
20
29
1.98
14594--14649
23
2.4
24
82
11
71
30
19
23
26
1.98
14857--14917
31
2.0
31
90
0
95
32
14
26
26
1.95
15972--16022
25
2.0
25
100
0
102
35
15
15
33
1.90

Tables:   1

The End!