Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: Scaffold1598 Parameters: 2 7 7 80 10 50 1000 Length: 30124

Tables:   1   

This is table  1  of  1  ( 13 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3249--3315
16
4.3
15
83
10
82
79
2
2
14
0.98
3396--3434
20
1.9
20
84
5
51
82
2
7
7
0.94
3353--3435
34
2.5
34
84
9
116
73
3
12
10
1.22
4319--4363
20
2.2
20
84
7
56
64
0
26
8
1.23
4316--4381
27
2.5
27
82
2
80
59
0
25
15
1.37
4370--4405
12
3.0
12
87
0
54
33
0
25
41
1.55
9445--9500
30
1.9
28
85
7
76
12
30
3
53
1.55
12357--12404
15
3.3
15
73
5
53
31
0
25
43
1.55
12351--12410
29
2.1
29
90
0
93
30
0
28
41
1.56
15517--15579
27
2.3
27
75
5
65
23
12
14
49
1.78
16647--16743
30
3.2
30
76
2
106
27
27
15
28
1.96
19590--19724
67
2.1
65
81
13
154
41
14
8
34
1.78
27657--27724
29
2.3
28
80
12
73
13
7
36
42
1.72

Tables:   1   

The End!