Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold243
Parameters: 2 7 7 80 10 50 1000
Length:  30504

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2140--2173
17
2.0
17
94
0
59
58
8
11
20
1.59
2618--2651
15
2.3
15
94
0
59
32
35
5
26
1.81
6707--6790
43
2.0
43
88
4
125
22
17
32
27
1.97
8158--8182
13
1.9
13
100
0
50
32
28
40
0
1.57
11395--11577
79
2.3
81
85
7
241
25
27
22
24
2.00
11374--11577
40
5.1
40
83
8
247
25
27
22
24
1.99
15670--15715
22
2.1
22
100
0
92
21
21
13
43
1.86
15886--15925
19
2.2
18
86
8
55
77
17
2
2
0.99
19601--19786
41
4.6
41
86
6
218
25
24
25
24
2.00
22529--23000
47
10.1
47
93
1
761
31
9
30
28
1.88
22639--22712
23
3.2
23
64
21
64
32
5
32
29
1.80
22640--22716
25
3.2
25
64
14
72
31
5
32
31
1.80
22529--23000
93
5.0
94
93
1
761
31
9
30
28
1.88
23119--23197
37
2.1
37
90
0
122
24
18
31
25
1.98

Tables:   1

The End!