Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2838
Parameters: 2 7 7 80 10 50 1000
Length:  31784

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
385--423
20
2.0
20
85
10
53
12
33
12
41
1.82
520--1174
211
3.1
207
79
13
574
29
21
18
30
1.97
5370--5555
39
4.7
39
79
9
191
24
19
28
26
1.99
5369--5553
79
2.3
78
81
5
203
25
20
28
26
1.99
7447--7630
39
4.6
41
82
11
206
24
22
27
25
2.00
7447--7630
79
2.3
80
83
8
225
24
22
27
25
2.00
7500--7663
78
2.1
79
83
7
201
26
21
27
25
1.99
15365--15549
79
2.3
81
84
7
236
24
22
27
25
2.00
15366--15549
40
4.6
40
83
9
216
24
22
27
25
2.00
15418--15582
79
2.1
79
84
6
210
26
21
27
25
1.99
23103--23304
40
5.1
40
82
8
220
25
21
27
25
2.00
23103--23285
78
2.3
79
82
10
214
25
21
27
25
2.00

Tables:   1

The End!