Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2167
Parameters: 2 7 7 80 10 50 1000
Length:  82447

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3144--3192
26
1.9
25
91
4
80
12
24
34
28
1.91
3067--3285
101
2.2
102
88
7
322
18
18
31
31
1.95
3206--3353
70
2.1
70
87
6
212
23
16
29
31
1.96
13954--13982
13
2.2
13
100
0
58
41
13
20
24
1.89
24804--24846
22
2.0
22
100
0
86
9
9
6
74
1.22
46863--47012
78
1.9
77
82
2
185
37
15
22
24
1.93
48265--48311
22
2.1
22
88
0
67
27
14
4
53
1.60
60621--60693
31
2.4
31
79
6
87
21
10
20
46
1.81
63249--63287
20
2.0
20
85
10
53
33
0
15
51
1.44
73623--73666
23
1.9
23
90
0
70
25
13
4
56
1.56
75268--75313
13
3.6
13
82
5
67
2
0
41
56
1.11
75269--75317
25
2.0
25
100
0
98
4
0
36
59
1.17
75271--75336
25
2.6
25
87
0
87
9
1
30
59
1.38
75343--75475
7
18.4
7
80
10
126
16
2
39
41
1.61
76401--76447
22
2.1
23
88
4
69
21
4
29
44
1.71
76359--76488
8
16.8
8
75
9
54
20
3
30
44
1.69
76422--76510
8
11.2
8
80
11
76
19
1
29
50
1.55
76421--76502
39
2.1
39
90
4
130
19
0
30
50
1.48
76299--82447
7
871.9
7
95
3
10800
14
0
42
42
1.48

Tables:   1

The End!