Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1145
Parameters: 2 7 7 80 10 50 1000
Length:  37179

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
216--271
21
2.6
21
80
8
60
37
30
3
28
1.74
1106--1143
19
2.0
19
100
0
76
36
21
21
21
1.95
5674--5727
24
2.2
25
78
15
60
11
22
3
62
1.43
7983--8029
22
2.1
22
92
0
76
10
4
4
80
0.98
8008--8056
12
3.7
13
82
17
57
14
8
4
73
1.21
10074--10126
15
3.5
15
82
12
63
62
7
11
18
1.52
10071--10126
16
3.6
15
83
7
76
60
7
12
19
1.55
13233--13270
19
2.0
19
100
0
76
36
21
21
21
1.95
17884--17938
15
3.8
15
85
2
69
1
21
1
74
1.01
19959--19993
17
2.1
17
88
0
52
25
8
5
60
1.49
22340--22386
23
2.1
23
84
7
62
51
12
4
31
1.59
25564--25601
19
2.0
19
100
0
76
36
21
21
21
1.95
30159--30199
17
2.4
18
80
8
50
14
24
4
56
1.58
30130--30183
24
2.2
25
78
15
60
11
22
3
62
1.43
32432--32462
15
2.1
15
100
0
62
12
6
6
74
1.21
32437--32481
20
2.2
21
92
4
74
8
4
4
82
0.94
32439--32507
13
5.8
12
72
26
58
13
8
2
75
1.15
34514--34566
15
3.5
15
82
12
63
62
7
11
18
1.52
34511--34566
16
3.6
15
83
7
76
60
7
12
19
1.55

Tables:   1

The End!