Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2499
Parameters: 2 7 7 80 10 50 1000
Length:  35935

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17--283
67
3.8
70
79
15
286
34
21
17
26
1.95
8--281
145
1.9
141
89
8
430
35
21
16
27
1.95
341--440
51
1.9
51
86
9
141
31
24
16
29
1.96
398--1018
69
8.8
72
88
8
870
32
21
17
29
1.96
398--1031
73
9.0
71
88
8
865
33
20
17
28
1.95
398--1208
190
3.9
213
84
9
950
33
21
16
28
1.95
914--1155
121
2.0
120
87
0
349
37
20
14
27
1.92
1035--1208
69
2.5
70
84
5
203
33
22
14
28
1.94
9605--9660
20
2.8
21
73
13
64
55
5
7
32
1.50
9639--9703
25
2.8
24
83
6
80
52
6
7
33
1.55
9724--9856
44
2.8
47
76
18
141
57
3
3
36
1.32
10340--10454
30
3.8
30
92
0
194
21
3
49
25
1.65
16893--16927
12
2.9
12
82
0
52
28
2
2
65
1.21
21477--21514
16
2.4
16
82
4
51
42
2
0
55
1.14
23377--23419
17
2.4
18
84
3
52
2
30
2
65
1.18
23430--23501
17
4.2
17
73
16
60
9
8
2
79
1.04
23430--23486
19
3.2
18
82
7
62
10
7
3
78
1.05
23609--23649
19
2.2
19
100
0
82
29
26
4
39
1.77
29856--29907
15
3.2
15
73
19
50
44
0
1
53
1.11
29940--29976
16
2.3
16
86
13
58
40
0
0
59
0.97

Tables:   1

The End!