Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2080
Parameters: 2 7 7 80 10 50 1000
Length:  44768

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4820--4850
15
2.1
15
100
0
62
6
38
0
54
1.26
4892--4941
15
3.5
14
79
15
50
42
8
24
26
1.82
8764--8810
24
2.0
24
83
8
60
53
4
2
40
1.32
10243--10331
26
3.5
25
75
15
67
60
3
2
33
1.25
10271--10338
18
3.8
18
73
21
54
60
4
0
35
1.17
10645--10713
14
4.8
15
75
18
58
56
0
10
33
1.33
10555--10691
71
2.0
71
81
8
167
60
0
5
32
1.26
10388--10712
3
108.0
3
68
13
141
60
2
5
31
1.34
11514--11564
3
16.7
3
87
4
75
33
1
1
62
1.17
11389--11684
157
1.9
157
94
2
522
30
4
5
60
1.38
11724--12200
3
159.0
3
70
11
221
32
5
2
59
1.33
11739--11776
19
2.0
20
89
5
60
28
7
0
63
1.23
11729--11791
14
4.4
14
69
23
51
34
7
0
57
1.28
11772--11963
35
5.7
32
73
14
113
31
4
2
61
1.26
11839--12059
58
3.7
61
72
18
162
31
4
3
61
1.32
25925--26331
88
4.6
88
76
7
374
34
19
23
22
1.97
25888--26463
44
13.0
44
68
15
227
33
19
23
24
1.97
30353--30387
15
2.3
15
90
5
52
14
0
11
74
1.08
34929--35151
104
2.2
103
92
2
367
17
18
31
31
1.95
35071--35221
71
2.1
72
91
2
243
23
16
29
30
1.96
42480--42703
104
2.2
104
93
1
378
17
19
31
31
1.95
42622--42773
71
2.1
72
92
1
252
23
17
29
30
1.97

Tables:   1

The End!