Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold453
Parameters: 2 7 7 80 10 50 1000
Length:  9861

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
352--396
10
4.7
10
89
5
67
80
6
0
13
0.91
360--397
11
3.6
11
86
13
62
78
7
0
13
0.94
352--397
20
2.3
20
96
3
85
80
6
0
13
0.89
1841--1886
20
2.3
20
84
0
56
23
19
17
39
1.92
1833--1906
30
2.5
30
84
8
80
22
20
18
37
1.94
3484--3514
12
2.6
12
100
0
62
80
6
0
12
0.89
3518--3563
14
3.5
13
77
17
51
76
6
13
4
1.14
3508--3582
25
2.9
25
84
9
80
70
5
14
9
1.31
3508--3578
38
1.9
36
85
5
97
73
5
12
8
1.24
4593--4653
11
5.4
11
78
7
59
73
6
14
4
1.20
4603--4712
17
6.2
17
71
17
64
72
3
18
5
1.18
4593--4653
23
2.7
23
76
5
70
73
6
14
4
1.20
4658--4690
14
2.4
14
95
5
59
75
0
18
6
1.00
4715--4777
33
1.9
33
84
12
85
53
6
26
12
1.62
6550--6603
20
2.7
20
82
0
63
24
20
18
37
1.94
6550--6623
30
2.5
30
86
8
98
21
20
18
39
1.93
6550--6614
20
3.2
20
71
16
53
23
21
16
38
1.93

Tables:   1

The End!